Gene detail

Detailed information of Csp01G001120.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp01G001120.1	STERILE20-LIKE KINASE, ISOFORM B-RELATED	Chr01	5271948	5310135	-

Gene Structure

More details in Jbrowse Sequence

CDS

Csp01G001120.1

ATGGACAGGATAGGGGTATCATTCCTGAACCCACTGGAGGACTACGAGTTAATTTACCGGATTGGGTGCGGCACTTATGGAGATGTGTTCAAGGCTCGTAACATCAGGACGTCTGAACTGGCAGCTATCAAGATTGTCAAGCTAGACCCTGGGGATGACATCACATCCATACAGCAGGAGATTACGATGATGAGGGAGTGCAAGCACAAAAACATCGTGGCCTACTTTGGCAGCTACCACAGGAACACCAAGCTGTGGATCTGTATGGAGTACTGCGGTGGAGGGTCACTTCAGGATATGTATCACGTGACGGGCCCATTGAAGGAGAAACAGATAGCATACGTGTGTAGAGAAACCCTTCAGGGTTTGTATCACTTGCATGAAAATGGCAAAATGCATAGAGACATAAAGGGAGCCAACATCCTTTTGACAGAGCGAGGAGATGTGAAACTTGCTGATTTTGGAGTGGCAGCAGAGATCAGTGCCTCCGTAGCTAAAAGGAAATCTTTTATAGGAACGCCCTACTGGATGGCTCCAGAGGTGGCTGCAGTGGAGAAGAAAGGAGGCTACAACCATCTGTGTGATATCTGGGCTGTTGGGATCACTGCCATCGAGCTGGCCGAGCTGCAGCCACCCATGTTTGACCTCCATCCAATGAGAGCGCTGATGTTGATGTCCAAGAGCAACTTCCAGCCTCCACGGCTAAAGGATAAAACCAAGTGGTCTGCAGGTTTCCAAAGCTTTGTGAAGATGGCTCTCATTAAAAGCCCTCGTAAAAGGCCTTCAGCTGAGACACTGCTGCAGCATCCATTTGTGACACAGCTGCTGACCCGTAACCTGGTCATTGAGCTGCTGGATATGGCTAACAGTCCGGAGCTCCACACCAGCCACACACACAGCATGGACGACAACGAGCTGGAGATTGGGGAAGTGTCTCCTGACAAGATCCAGTCAGCAGGGAAACACCTGCCTGTAGAGAGGACCCTGTCTGAAGAACAATTTGACAAGGTGACATTTGGGCCTCCACTGAGAAAGGTCACAGAGCCATATCCTGTTTTGCAAGACCGTTATGATGATGACTGGAGTCTGTGTGGAGATGAAGACAACTCACCGAGTTTAACTCTCAGGAGGGCACCAGCAGCTGATGAAAGGACCAGTGGTTTGTTCTCCCCTTCAACAGCCTCTCTGCCAGCCTTCAGCTCTTTAACTCCAAATGCAGAGGACCTGCTGAGACCGAGCTGTACACTGGGCCCTGACACTGCTGTCACTTCTGACTCCACCTCCACAGCAGTGTTGGCCAGGTGCTCAGCCACACAGGACATCAGACAGCGCTGCAGTGATCCATGTCTGCCTGTGGAGGACGCTGTAATAACAGAGAGAAACAAGGTTACCTGTGTTTCCCCTCCAACAAGAGAGACGCCACTGTCGCCTGAATGGAGCACGCTGAGGAAAAAGACTGAATATTCTCGGGCTGATTGTCATGGACTTCCTCCTACCCCTCATGTCCATATGGGAGCCTGCTTCTCCAAAGTCTTCAATGGTTGTCCTCTTAGAATCCACTGTGCTGTTACCTGGATTTTACCCGAGACGAGAGATCAGTACCTTATTCTAGGAGCAGAGGAGGGTATCTACACACTGAACCTTAATGAACTCCATGAAGACACACTAGTGAAGCTGCTGCCTCAGCGATGTACGTGGCTGTATGTCATGAACAACGTGCTGATGTCTGTGTCAGGGAAGTCTTCCCAGCTTTACTCGCACAGTTTGACAGCTCTGTTTGAACAGAGAGGACATCTTCAGAAAAAACACAGCAGTCTGTCGCTCGGCACCAACCGCTTCACTGAGAGGATCAACCTCAGAAAATTTGCGACATCTGTGAAGATTCTCGACACTAAAGGCTGTAGAAGATGTAACGTTGCAAGAAACCCATACACAGACAGTACATTTCTATGTGCGGCAGTTCCCACTGGCCTTGTTCTTCTATTGTGGTATGAGCCTCTGCAGAAGTTCATGCATCTTAAGCACATAGCGATCAGGTTACCAGACTCTCTCCCAATATTTGAGCTGCTGGTGTTGGAAACGGATGAGTTTCCCCAGCTGTGTGTCGGAGTGCGAGACTGCAATAACGGGAAAGCCCCAAACAGCCAACAGCTAAAGTTTGATATCATAGAGCTGAACAGCATACCTATTTCTGCACCAGATAGTGGAGCACTCATGGCAGCACAGGTAACCCAGCTAGACAGAGACACAGTCCTCATCGCATTAGAAAAAACTGTTAAGATTGTGAACCTCCAAGGGTTTCCGTCAAAGGATCTTGCGGCCGTAATGGTCTTCGACTTCCCCATTGAAACTCTAGTCTGCTTACAGGACAGTGTGTTGGCTTTCTGGGAGCATGGGCTTAAAGGAAGGAGTTTTCATTCAAATGAGGTAACACAAGAAATTACAGACAGGAGTCGAGTATTCAGGGTTTTGGGAACAAACAGGGACATCATCCTTAACAGCACACCAACAGATGACCCCTCAGCGCTGAGCAACCTCTACATCCTGACCGGACATGAAAGCAGCTACTGA

Transcript

Csp01G001120.1

CAGTCCTGGTAGtgagctctgtgtgtgtctgccagcCGAATCCACACTCCAGCAATCGGACAACTCCAATGAGTTCCCTGTAAGCAGTCAggcaggcagtgtgtgtgtgtccatccgCTGCTTTCTCCTCCGACCGCTGACACTGGGATGTGCGAATAGAAAAGCCCGCCAGGCTCCAGCCACAGCACCAAGGTCTCCAACATGGACAGGATAGGGGTATCATTCCTGAACCCACTGGAGGACTACGAGTTAATTTACCGGATTGGGTGCGGCACTTATGGAGATGTGTTCAAGGCTCGTAACATCAGGACGTCTGAACTGGCAGCTATCAAGATTGTCAAGCTAGACCCTGGGGATGACATCACATCCATACAGCAGGAGATTACGATGATGAGGGAGTGCAAGCACAAAAACATCGTGGCCTACTTTGGCAGCTACCACAGGAACACCAAGCTGTGGATCTGTATGGAGTACTGCGGTGGAGGGTCACTTCAGGATATGTATCACGTGACGGGCCCATTGAAGGAGAAACAGATAGCATACGTGTGTAGAgaaacccttcagGGTTTGTATCACTTGCATGAAAATGGCAAAATGCATAGAGACATAAAGggAGCCAACATCCTTTTGACAGAGCGAGGAGATGTGAAACTTGCTGATTTTGGAGTGGCAGCAGAGATCAGTGCCTCCGTAGCTAAAAGGAAATCTTTTATAGGAACGCCCTACTGGATGGCTCCAGAGGTGGCTGCAGTGGAGAAGAAAGGAGGCTACAACCATCTGTGTGATATCTGGGCTGTTGGGATCACTGCCATCGAGCTGGCCGAGCTGCAGCCACCCATGTTTGACCTCCATCCAATGAGAGCGCTGATGTTGATGTCCAAGAGCAACTTCCAGCCTCCACGGCTAAAGGATAAAACCAAGTGGTCTGCAGGTTTCCAAAGCTTTGTGAAGATGGCTCTCATTAAAAGCCCTCGTAAAAGGCCTTCAGCTGAGACACTGCTGCAGCATCCATTTGTGACACAGCTGCTGACCCGTAACCTGGTCATTGAGCTGCTGGATATGGCTAACAGTCCGGAGCTCCAcaccagccacacacacagcatggaCGACAACGAGCTGGAGATTGGGGAAGTGTCTCCTGACAAGATCCAGTCAGCAGGGAAACACCTGCCTGTAGAGAGGACCCTGTCTGAAGAACaatTTGACAAGGTGACATTTGGGCCTCCACTGAGAAAGGTCACAGAGCCATATCCTGTTTTGCAAGACCGTTATGATGATGACTGGAGTCTGTGTGGAGATGAAGACAACTCACCGAGTTTAACTCTCAGGAGGGCACCAGCAGCTGATGAAAGGACCAGTGGTTTGTTCTCCCCTTCAACAGCCTCTCTGCCAGCCTtcagctctttaactccaaatgcaGAGGACCTGCTGAGACCGAGCTGTACACTGGGCCCTGACACTGCTGTCACTTCTGACTCCACCTCCACAGCAGTGTTGGCCAGGTGCTCAGCCACACAGGACATCAGACAGCGCTGCAGTGATCCATGTCTGCCTGTGGAGGACGCTGTAATAACAGAGAGAAACAAGGTTACCTGTGTTTCCCCTCCAACAAGAGAGACGCCACTGTCGCCTGAATGGAGCACGCTGAGGAAAAAGACTGAATATTCTCGGGCTGATTGTCATGGACTTCCTCCTACCCCTCATGTCCATATGGGAGCCTGCTTCTCCAAAGTCTTCAATGGTTGTCCTCTTAGAATCCACTGTGCTGTTACCTGGATTTTACCCGAGACGAGAGATCAGTACCTTATTCTAGGAGCAGAGGAGGGTATCTACACACTGAACCTTAATGAACTCCATGAAGACACACTAGTGAAGCTGCTGCCTCAGCGATGTACGTGGCTGTATGTCATGAACAACGTGCTGATGTCTGTGTCAGGGAAGTCTTCCCAGCTTTACTCGCACAGTTTGACAGCTCTGTTTGAACAGAGAGGACATCTTCAGAAAAAACACAGCAGTCTGTCGCTCGGCACCAACCGCTTCACTGAGAGGATCAACCTCAGAAAATTTGCGACATCTGTGAAGATTCTCGACACTAAAGGCTGTAGAAGATGTAACGTTGCAAGAAACCCATACACAGACAGTACATTTCTATGTGCGGCAGTTCCCACTGGCCTTGTTCTTCTATTGTGGTATGAGCCTCTGCAGAAGTTCATGCATCTTAAGCACATAGCGATCAGGTTACCAGACTCTCTCCCAATATTTGAGCTGCTGGTGTTGGAAACGGATGAGTTTCCCCAGCTGTGTGTCGGAGTGCGAGACTGCAATAACGGGAAAGCCCCAAACAGCCAACAGCTAAAGTTTGATATCATAGAGCTGAACAGCATACCTATTTCTGCACCAGATAGTGGAGCACTCATGGCAGCACAGGTAACCCAGCTAGACAGAGACACAGTCCTCATCGCATTAGAAAAAACTGTTAAGATTGTGAACCTCCAAGGGTTTCCGTCAAAGGATCTTGCGGCCGTAATGGTCTTCGACTTCCCCATTGAAACTCTAGTCTGCTTACAGGACAGTGTGTTGGCTTTCTGGGAGCATGGGCTTAAAGGAAGGAGTTTTCATTCAAATGAGGTAACACAAGAAATTACAGACAGGAGTCGAGTATTCAGGGTTTTGGGAACAAACAGGGACATCATCCTTAACAGCACACCAACAGATGACCCCTCAGCGCTGAGCAACCTCTACATCCTGACCGGACATGAAAGCAGCTACTGAGAGAAAACGGTTCGTCTTCTTCAGAACTACAGAGAACTACAGAGAACTACAGACCTGTTCTGTAATCCTGTCATGGAAATGACACCAGCACCACGCGATCACACCGAGTCTCTGCAGTGAATGACAAATGACAGTATTTGATTCAGCTGCCTTCCCAGACTCAGTGTAAGCTCTTGGTCAACACATTCACAAATGCAATTCTAAAAAAGTTCAGCCACTGTATGAAACAATGTTGAATGTTGAATGttccaaacaggtgtttttgGAGCATTCCAATTTtcccagtctttttttttccctgacaaACTTGTCATGTTTTAGATAAGAATATATTTACAGAAATGTATGAAGTTGAtgatataaaacattaaatatattgccT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00780	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001180	Domain	Citron homology (CNH) domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR021160	Family	Mitogen-activated protein (MAP) kinase kinase kinase kinase	Interproscan
IPR050629	Family	STE20/SPS1-related Proline-Alanine-rich Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48012	STERILE20-LIKE KINASE, ISOFORM B-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0008349	Molecular Function	MAP kinase kinase kinase kinase activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-