Gene detail

Detailed information of Conbi24494 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi24494	LEUCINE-RICH REPEAT-CONTAINING	LG2	37262661	37306573	-

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi24494

GACAAGGAGGAGTTGTTCCACCTGTTTGACGAGAACGGCAATGGCGTCCTGGAGCTGAAGGAACTGGGCAAACTGAACGCCGCCATCTTCAACATCTTCCCCCGCTTTGGCTACAAGGGCAAGGACACACCCGGAGACAGCATCCCGAGTGGGTTTCCGATGGAGATCCTGCTGTGTACGACAATCACGCGACTTGACCTGTCATACCAGGGCTTCGTGACGATCCCCGCGGAAATCGGCAACTTCGTCCACCTCGTAGAGCTGCTACTGAGCCATAACCCCAACCTGCTCAGTATCCCTGCGGAACTCGGACAGCTGAAGACACTGAAACAGCTGGAGTTGGATGGTTGCCCCCTGCTGAAGACCCCGCCCAAGGAGATCCGAGACAAAGGCTTCCAGTCGACCTTCGCCTATCTCAAGAGGCTCCTCAGTGGGGCGTTACTCAGTAAACGCACCAAGCTCATGTTGGTTGGGCTCGGTGGTGCGGGCAAAACAAGCCTGGTACAAGCCCTGATGTCAGACAAGAAGATCGCAGACTTGCAGCACGGGGAGTCCATTACAGATGGTATAGACATCCACTCGTGGAAAGTGAAATGGAAGGAAGATGAAATTATCTACAATGTTTGGGATTTCGCTGGACAGACCGTCTACTACAATACTCACCAGTTTTTCCTGTCGAGTCGAGCTGTGTACCTGTTACTGTGGAACGTGAGACTGGGCTACGAGCACGCCGGCCTCGACTTCTGGCTCAGCTCCATCTCCGTACAGGCCCCAAAGGCTCCCATATTCGTGGTCGGGTCGCACATCGATCAGGTGAACAAGTCCGAGATCCCGATGCATGAGATGCAGCAACGCTACCCCCAGATCGCCGGCTTCCACTTCATCAGCTCGTTCACCGGCCAGGGTATACCAGATCTGGAGAGCCAGGTGTTTGACGTCACACTACAACAGAAGTACATGGGGGAACACATTCCCGCTGTCTGGCTTACATTCGAGAACAACATCGCTGCTGTGCGGAGTAAGGAGAACATCATTACCTACAGCCATGTGGAGAAGATCGCTAACCTGTCCGGCATATTCGACTCCTCTGAAATTTTCCAGGCTGTCCAGTTCCTGCATGACCTTGGCAGTGTGCAGCACTTCACAAACGACTACCTGAAGGCCAAGGTCGTCATCAACCCCCAGTGGATCGTCGACGTGATGGCCTGTGTCGTCTCCGTGAAAACCAAGGTCATCAAGGAGGGTCGGCTGCACCATCACGACATCTCGGAGATCTGGTCAGACTACCCCAAACAGCTGCACAACTGGCTTCTAAAACTGACTGAGGCATTCGATCTCACGTTCCCGCTCACCAATCAGGCAGTGAACCTCGTACCGTGCTTACTACCTGAGAAGAAGCCAGAGTTTGTATTCCCAGAGCTGGAGCGCGGCTCAGATATCCGGGAGAACAAAATGGTCTACAAGTTTGACTACCTGCCCGCCGGACTGTTCAACAGGGGACAGGTGCGACTGCATCAGCTGTCGGACAGTGCTCTGGTTTGGAAAAAAGGCTCCTTTCTGAAGAAAAACGTTCATATTGCCCTCCTAGAACAGACCAGGGATTCCGAGCTGGTGGTCACGGTCCAGGGGCCGCGGCCAGAAAACATCCTATTCCTCGTGCATGAGGTGTTCGAGGGTCTGATCGCGGAGTCGTTCAATGGAGTGATGTACGATTTCAGTCTGCCCTGTCCGGACTGCGCCAGAATGGTGATGAAGGACCACCACATGTTTGCCGCGTCCACAATCCGACGAGCTATCGACATGCAGGCACCGTTCCTACAGTGCATCAAGTACTTCCACACCATCTCGTGTGCTGACCTACTCACCCTGCTGCCCCCGGACAGTCATAGTGACTTTGATGCCCACCTCGTCCACAGTGTCCAAGGGCTGAGAGACCTCCGCAAGGCTCTGTCCACAGACATATTTATATCATACTGTCGCCTGGACAAGAATATGGACCCAGCATCCTACATTCTGCCGGGACGGGTCAACGATGACCTGACAAACAAAGGTTACAGATG

Transcript

Conbi24494

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR050715	Family	Leucine-rich repeat and signaling effector domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45752	LEUCINE-RICH REPEAT-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-