Gene detail

Detailed information of Conbi16887 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi16887	PROPERDIN	LG4	104391280	104485988	+

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi16887

ATGTACTATGGGATTTTAACTTTCAGGAAATTACTTCTGTCCACCTACTGTATGTCAATATTTCGATTTCAAGATGAAGTCCCGCCACAGCTGGACTGCTTCACCCCTCAGATATTCTATGCGGACCGAGGCCGATTGACAGCTGCTGTGAACTGGACCGAACCGACTGCAGCGGATGTTATTGACCCTAATCCTGCCATTGAACAACTGGAAGGTCCCTCGCAGGGCGACGTGTTGGCAGAAGGCGCTCATTTCGTGAAGTACCGAGCATCAGACGATGCTGGAAATCTGTCTCCACTGTGTGGCATCGAACTGAGGGTCTCAGCAATTCCATGTGAACATCCAATGGACAATATGTTGGATAAATACATGGAATTTAACTGTTCCGCGACAAGCTACTACTATGGCGTTACGTGTGATTTATCGTGTGAACAAAACCTGCCACTGAACGGAAGTGATGTCATCACATGTGAACGTACCTCTCCAGATTCAGACACTGGTTTCTGGCACTGGAGCTCGGAGTACAAGCCTCATTGCGAAGTGATCAGCTGCCCAGAACTAGATCCACCACCAAATGGGGCATTGGTTATGGACAGCACTGACCTCAGACCAGTTGTTAGTATGAAATGTCAAGAGGGGTTCGATCTAGCAGACTTTATTGATGGATTTGATGGTTACTTATACTAGTCCCTGTTGCCATTCTTACTACTGCCGGCAGAGCTGCACTATGAAGGTTCATGTAACGACACCGACACACAGGAACAAATCAAAGAACAGTATATCGAGCGAATGAAGGCAATCACCAGAAATCCCTGGCCAAACATATGTCGCAACAGTAGCACGTGTGATGCAAACAATGTGAAGGTCGTGTGCGGACCACTCGTCACGAGGAAACGTCGCTCTGAACATGATATCGACAAACGGCAGGCTTCTGGTAATGATGTCAGTATCAAATGGGACTTTGCTGTTCCTTTCGACAAAGGTAACATGTCGACCATGCAAGCTTACATACTCTTCATGAGTGATCTAAACCACATGGCAGCAGAGTTTGGGACACTGCTAAATGACGGTTATGTGGACATTCCTGGGCTAGCGCTACGAACCGATAGCTACAAGAATGGTACAAGCCCAACTTTTAATTGCAGTGGAGAAGGTTACAAGCTAGATGGTGATAAGTGCAAGCCCTGTCCGATTGGGAGACAACTAGTTTCCGATCTATGTGAGTTATGTCCCCTGGGAACGTACAAAGATGTGGATTCTGAGCCTCTGTGCAAGCCATGTGACACGCCGTATCGCCTAGAGTCGTGTTCGCCGTGCCCAGTGGGCAGATACCAGGACTTGGCGGGCCAGGACGTCTGTCTGGACTGCCCGGCTGGCACCACCACCGCCAACACAAACACCGACTCGTCCGATGGATGTTATAGCTATGACTTGGATATGTCGGCCCCTCAAGAAACGGAAGCTACCAGTGGCGTTTTTACGGCGGTCATGCAGTCTGCGACCATCTCATTCTGGGTAAAGCCACTTACCCACTTTATAGGGGATGCAGATGTGACGTTAAACACCAACACAGCTGTCAACATGAGTATCAAGCTTACATCCACAATTCAAGTGAAAATAGGGACATCTGTGTACGATACAGGGCTACCCCTGTTACAAGGACAGTGGACGCATGTATGTGTCACCTGGGATACGGCAGCGGACACATTGATCATCTTTATAAATGGCATTGTAGCTGTTCAAGACAATGTCGTGGCCAGTGTTACACCGATTATCGACGGAGGCTCTGTTAGTGTCGTCTCATCGGGTATAATATTCGAACCATCTTTTTTAGGAGGACTGTACGTGTCCGGCTTTGCAATCTATGATCGACCATTAACTGAAGAAGAAATACTCCAGCTGCAAGATGTATGCACAAGTACAATGCCTGACGTTCTGGTTGCTATGGAAATATTCAAGAAGAGTAACGGAGCTGCCGCTAAACTTGTGACACCATCAGGCTGTGATGTTAATGGAGGCTGGTCGGATTGGCGTGACTGGACTCTTTGTGACGCCCCTTGCGGCGGAGGCACGCAGTACAGAACCCGGATGTGCAACAACCCAGTCAAGACCCCGTATGGAGCCGACTGTGTGGGCTATTCGACCGAAACCAGAGCTTGTAATGAGGATATTTGCAGGGGTATGTGCCAATTCAATAGTCTAGTATTAGTATAA

Transcript

Conbi16887

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF02494	HYR	HYR domain	Domain	Interproscan
PF07699	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR003410	Domain	HYR domain	Interproscan
IPR006558	Domain	LamG-like jellyroll fold	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR011641	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR030476	Conserved_site	Pentaxin, conserved site	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR052065	Family	Complement and asymmetry regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22906	PROPERDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-