Gene detail

Detailed information of Conbi16244 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi16244	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	LG14	63392875	63448708	-

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi16244

ATGATCCTACACCCCCAGGTAATCCAACAAGAGGGGAAGACATGGCGGATGGTGATCCAAGACCAGAACAAATCCCAGGGGCTCGCCCCGCCCATATTCCAACACATCCTGCGCTCCAGTGTGTTTCACGCCTTCATTCTTCTGATGGTTCTTGCCAGCGCGATTGTTGAGGCCAGCCTCAGCTTCGATCACCGGACCGTGGATCCTAACAATAAAATTGACGTCTTCTACAAACTTGAGGTTTTTGTGACCTTGCTGTTTGACCTTGAAGCGCTGTTCAAGATCTGGTGTCTTGGTTTCCGTGGTTACTGGCGACGTTCACTTCACAAATTTGAGCTGGTTCTCTGTATTGGAACAACCCTGCACATCATACCGGACTGGTACAGGACACAGCTGACTTACTTCCAGGTGATGAGAGTTGTCCGATTGATCAAGGCTTCTCCAATGTTGGAAGATTTCTGCTGGAAGATCTTTGGTCCCGGGAAAAAGCTTGGTAGCATCGTGCTGTTCACAATGTGTCTGCTGATCATCGCGTCCAGCATCAGTCTACAACTATTCTGCTCCATTGAAGACTTTGATAAGTTTGAGACGTTCCCTAAGGCATTCATGTCAATGTTTCAAATTCAAACACAAAAGAGTTGGATCGACGTCATGCACGACACAATGTGGAAAACAGGGAATTTTTCCGTTCTCGTTGCGATTTATTTCACGTTCTACCATTTGTTTACGACGTTGATCGTCATCAGCTTGTTTGTGGCTGTGATTCTGGATAATCTTGAGTTGGACGAAGACATCAAGAAACTGAAACAGTTGAAGGCCAGCGACATGGGAGCTAACGAGTCACAGATCCTGCCGTTTAGGCTGCGGATATTTGAGAAGTTTGCCAATCACCCACAGATGGTCAAACTGCACAAACTGACCGAGTTCGACATCGCGGACATTCGCGAGAGCTTCATGCGACAGTACAGCACCCCCCAGCTGAATCTCGTGCTAGACACGGCCGAGGAGAATAACGGAGAAAGCCTGTCGTTCATCAAATCGTCGCCAATCAGTCTCGTAAAGGAGGCGGCTGTCAGCTCTCGTAGTGGAGGCTCGGTGATGAAGCAGGGAGGGATATCCTCACTTATCAGGGAGTCTAACCAGCAGAAGTTGATGGGCGGTGGGTCGGGACAGATGGTGAACAACGGACAGAAATCTCTCCTGTCTCAGTCCTACCAGATCAGGGTCACACGAAGGAGTATGCGAGGCTCGAGACCTGGCAGCCTGAAGTTATCGGGCCAGACACCCGGTAACATCAAAGAGAACGGAGACATTACTCATCTAATGATGGGCGGCCGGGGATTGACGGACCAGGGAAATGTCGGCCATCGCACCGACGACTTCGATATCAAGATGTTTCAGCAACGGAAACAACAGGCGGAGATAAAAAGAGAGCAGATCCAAGACGACCTCCGAGAGAACCACCCATTCTTTGACACCCCGCTGTTCAGCGTGGGCCGGGAGAGCAGGTTCCGTAAGGTTTGCCAGCTGATCGTGAACGCCAAGTACAACTACATGCTGCGAGATCCTATCACCGGCAAGGAGATCAACAGTAGCCCCTACAAACGTATTCTGAAGCTACTGGGACTTGTGACCTACCTCGACTGGCTCATGATCTTTGTCACCGTCATGTCGTGTATATCCATGATGCTGGAAACTCCCCGACAACGCCTCACTACCACGCCCAAACTTAGGATTGCAGAATACATATTTGTGTTCAGCATGACGATAGAAATGGCACTGAAAGTTCTCTCCAACGGGTTTTTCTTCACGCCTAAAGCCGTCGTCAAGGACATTAGCGGTATCCTGGAGCTATTCATATACTGGGTGAGTGTGATATTCCTGATCTGGCAGCCGGGCGAAGTGCCCCCAGGGTCGGGCGCCCAGATCCTGATGATCCTCCGCTGTCTCCGTCCACTCCGCATCTTCATCCTCGTGCCACACATGCGCAAGGTCGTGTACGAGCTTGTGCACGGATTCAAGGAAATTCTACTGGTATCAGTCCTACTGATCGTGCTGATGTTCGTATTCGCCACGTTCGGTGTCCACCTACTGGGCGGGAAGTTGGCAAAGTGCAATGACCAGAGTATAGTGCTTAAAGAGGATTGCGAGGGCACGTTTATGTCGCCAATGTTTGTCACCCGGATGCACGTAGATAAAGGCCCCGGAGGTCGAATGCCGGGATTCCTTGTACCACGGGTCTGGGCGAATCCACACAATTTCAACTTCGATACAATCGGCAATGCAATGCTCGCTTTATTCGAAGTCCTCTCCCTTGAAGGATGGCTGGAAGTTCGCGACGTCATAATTGAGCGAGTCCGGCCGATGGACTCGATCTACGTCCACGTGTTTGTGTTCATTGGTTACATGATCGGGCTCACGTTGTTTGTCGGCGTTGTCATTGCGAACTATGGTGAAAATAAAGGCACGGCGTTGTTGACCGTTGATCAGCGAAGGTGGATGGATTTGAAGGGTCGAATAAAGCTCGCTCAGCCGTTACACATACCTCCCCGACCAGATACGCGCGGATTTCGATCGATAATGTACGATATCACGCAGCACAAGTTCTTCAAGAGAGCGACCGTATTTCTCGTTATTGCGAACTGCTCGTTGCTATGTGTTCCGTGGAAGGAACAGGATGAGGATGTTGCCGTGGTTACAAATTCCACGACAACAGTGGCCCCTGCTGTGGTTACAGAGAAGCCAATGTCATATTACCTCGCCACAATATCAGCAGTGTTTACCATTCTTTTTCTCTGTGAGGTCGTGATGAAGATGATTGCTCTGACGCCGGCCGGTTACTGGACAAGTCGACGCAACAGATTCGACATGTTTGTCACCGTTATTGGTGTTATCTGGATCTTTGTCCACTTTGCCTCACAGGTCAGTTTGAACACCTACATATTTGGCTCGTGTGTCATCGTGCTGCGATTCTTTACAATCCCCGGCAAGCATGCAACACTGAAGATGTTGATGCAGACAGTCGTCATGTCCGTCTTCAAGAGTTTCTTCATCATCACGGGCATGTTCCTGTTGATGTTGTTCTACGCCTATACAGGGGTTATACTGTTTGGCAGTGTGAAATATGGCTATAACCTCGGCAGACACGCCAATTTCAAGACGTCGTACAACGCCATAGCCCTGCTGTTCCGTATAGTCACCGGGGAGGATTGGAACAAAATCATGCACGATTGTATGGTGTGGAAGCCATTTTGTTCCCAGAAACCAGGAGACAATTTCTGGGAGACGGATTGTGGAAATTTCACGACGTCGCTCATATATTTCTGCTCGTTCTACGTCATCATTACCTACATTGTTCTTAATCTGCTGGTCGCCATCATCATGGAAAACTTCTCGCTGTTCTACTCCAATGAAGAGGACGCGTTGTTGAGTTACAACGACATCCGCCAGTTCCAGAACACATGGAATATTGTCGACACGAACCGCAAGGGTGTGATATCGGTGCACAAGGTGAAATACCTGCTACGATGTCTACGTGGACGATTGGAGGTTGACTTGGAGAAGGACTGTCTGTTGTTCAAACACATGTGCTATGAGCTGGAGAGACTTCACAATCAAGGGGACGTAACTTTTCATGACGTCTTGAGTATGCTGTCTTACCGATCCGTGGATATCCGTAAGAGCCTACAGCTGGAGGAATTACTCTCGAGAGAAGATCTGGAGTACGCCATCGAGGAGGAGGTCGCCAAACAAACCATCAAGAACTGGCTCGATAAATGTCTCAAACGCATCAGGGCTAAAAACCATTCTAACCTGATATCGAACCTGCGTGCGATGAACGAGCCGTTGTCCACGGTGACAGAACTCCCGGCCAGTGCAGCTGAGAGCAGCGAGGAAAGCAGGGATGAGGCGCCGATCATCCGAAGTCGGAAAAAGGGAACGGTGGAACTAAACCCGCCAAATATACACATAGAACCACCACCACCATCCTCAAAGTCCCCGAGTATGCGACGTTACCTGACGCCCACATTGAGTGATGCATCGGTAAGGGACAAGGAGAGAATGGGCGTGAAGAAAAAGTCAAACCGATTAAGCACAGGTAAAACCCTTGGGGCAGGACTAAGCCTCGGTCTACTGAATGACAATATGGCCGACGTTGGACCGACTGAGCGGGAACAGTCAATACTGATTGGCAAACACGTGTCAAACGATGTCAATAGCTGGTGGAAGGAACAAGTATACACCAGCTACTCGGACAAATCGGAGTGA

Transcript

Conbi16244

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR005821	Domain	Ion transport domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR027359	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR028823	Family	Sodium leak channel NALCN	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46141	SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005216	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0005261	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006811	Biological Process	monoatomic ion transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0032224	Biological Process	positive regulation of synaptic transmission, cholinergic	Interproscan
GO:0032230	Biological Process	positive regulation of synaptic transmission, GABAergic	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-