Gene detail

Detailed information of Conbi05517 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi05517	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	LG5	20442933	20463751	+

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi05517

GCAGTATGAACCCGCCCAAGAGAGAGAAGGCGTGGCAGGAGAAGCGCGTGTTTTTCCTCACGCCCCAGGTCCTCACGAACGACCTCAGTCGAGGGTCGTGTCCCGCGATTGATCTGAAGTGTTTGGTTGTGGACGAGGCACATAAAGCTCTCGGCAATCATGCTTATTGTCAGGTGGTGCGGGAATTGGTGAAGTACACAGAGAATTTCCGCGTTCTCGCCCTCAGTGCCACGCCCGGCAGTGATATAAAGGCAGTGCAGCAAGTGCTGTCGAACCTGCTGATCTCACACATCGAGATCCGGACGGAGGAGTCGATCGACATCACACGCTACTCCCACGAACGAAAGGTCGACAAGGTGGTTGTGCCACTGGGCGACGAACTCTCCAACGTCCGCACCAAATATATACACATAATGGACGGTGTGGTTGGGCGTCTGAAGCATCATGGCGTCCTGTATAACCGTGAAACGACCAGCTTCTCCAAGTTCCTCATCCTCAAGGCTCGTGAATCCTTCAGGCAGAACCCACCGGAAAAACTACAGAGGTCGCAGTACGGGATGGTGGAGGGTGACTTTGCTCTTGCCATGAGCCTGTACCATGGCTTTGAGCTGCTGCAGCTACACGGGCTCCGGCCCCTCCATAACTTCCTGGATGGCATCGTCACCGGTGACAAAGGTCACGGGCGAACCCGCACTGAACTCGCCCGCAATGCAAACTTCACTGACCTGATGGACATGCTGTCTCACAAATACCGCGAGACCCCAAGCCAGATGAGCGGCACTAAGCCAGTGATCATCGGCCATCCGAAGTTGGAGAAGTTACAGGACATTGTCGTGGAGCACTTCAACACGTACGACAAAAAAGGAGACACGCGAGTGATGATATTCTCGCAGTACCGCGACAGTGTACAGGAGATCACAGAAATGTTGAACCGACACCGGCCGCTGGTCAAGGTGATGAACTTCATCGGTCAGTCCTCGGCCGGCAAGGCCACCAAAGGCTTCACACAGAAGGAGCAGCTGAAGGTGATGAGACTGTTCCGGGAGGGGGGCTACAACACCCTGGTGTCCACGTGTGTGGGGGAGGAGGGCCTCGACATCGGTGACGTCGACCTCATTGTCTGCTTCGACGCCCACAAGAGCCCGATCCGCCTCGTACAGAGAATGGGCCGCACCGGGCGGAAACGTGAGGGCCGGATAGTGATGCTGGTTACACAGGGCAAGGAGGAGCAGATCTACAACCAGAGCCAGTACTCGAAGCGGAGTATACACAAGGCCATCTTGAACGGTGCCCGGTCCCTGCATTTCTACAGCAACAGCCCGCGCATGGTTCCCGATGGCTGCAACCCGGCCGCCCACAAAATGTACATCACTGTGAAGGAAGGCTTCAAGCCTACCAGGAAGGTGGACACAGATGGCAGCACGAGACAGGGCAAGATAACTAGCTTTACTAGTGGTTTGTATCATCGGCTGACAGAAGGACTCTACGGTTTCCTAGCCGATGCTCATAACGAAAGTCACGAGCCTGGTATTCTCTACCAAATAAACCCCGCATACTGTACTCTGCAGACCGAGTGTTCCGGCCGTGTGCTGGGTAAGACGTTATCGCTGTGTGACTGGAGCCCGTGGCAGAACACCTTACAGCCGACAGAGCAGATAGACCACTCCCTCGCCTCCCGACACCTCGTACAGCTCATGGAGTTCATCCAGCTCCAACAATCACTAGAGCCGGGAGATGATCCGTATGGTCTGGAGATGGCCGCCTACCTGAATGAAGATGACGTATTGAAACCTGGTGAAACTGACGGCACTGCAGGATCCATTCTCAAGTTCTGTGTACCAACTGATACAAATGTGAGTGTCTCTGACATCAGTAATGGTGATAATGAAAACAAACAGCCTAGTGATATTAGAGATAAACTTAAGATGTTCAGTCATGTTGGTATTTCAGATATTGATGATGTAGAAATTGTTAGAAAGTCTATTGTTAAAACTCAGGTTGCCAATTTAAGTAATGGGAAGAAAAGTGGCTTGAGTAGTGCCAAGTCTATGGAAAAGAAAATGGCTGAGGGAAAATCACGTAAGCGTAAGAGGAGCAGACATTCTAGTAGACCAAGTGCAGTTGTTGAAGTTATTGCTGATACAGATGGTAGTGATTTTGATCAAGCAGAGCCTGCTTTGGGCGATTTAATATTGACTGAAGCTACAGTGACAAATAGTGCAAACCTAAACAACAATACAGATAATATGGCAAGTGAGTACAGAAATGCTGACGATAAACATGTACCTGACCCTTCTGATGGTACAGGAATAATGGACAAAGAAGAGGAGAGGCTGTATGTAATACGAACACCGCCAACCGTTCAAGATGCCATTGCTGTTTGTGACACAATTGGAGAAGCAGTAGACATTGCCAAGCTTGATCTAATAAAACTGGTTGAAGAGTGGGAAAAAGAAAACGAAAATGGAAAATATATTGTGTATCCGAAATCCTCAAAGTTCGGTGGAAAATGTTGTACATCTACAATTGTACAAGAAAAAGAATCTGATAATCACACGAATCTACCAGAGATAGATGAAACGAATGATGAAACAAATTTATTATCCAAAACCGTTGCACAAACTGATAAAGTTTCCAACCAAACAAATGTGTCTGGCTACAACGTATCTGTTCCAGTGTGTAATGTAGATATGTCTGTATCTACTGATAGAGTTGTAGACACAGTAGCCTTAAAAGACGCAAAGGAACATGTCACTAATGACCTCTGCAATGGTAGTTTGGAGGGTAATGCCGGAGAATTTGCTGATATGTTGTCACCATTGACACAGCAAACAGATAAAGCCAACACACCAGTACATTCTTCTTGGGACACACAAGAAAGCACTGGTTTTATGGAAAATGCAGAATTAAAGTGTAGTAATGATCCACTTGTCGATACCGATATTCATATTACACCTGTTGCAAAGAGAACAAAACTGTTTCAATCTTCAGCATTTTCAAATTCGAAGTTGAAAACGAACACATCTGTAGAAACCTGCGAAAGTGAACAGGACACTGAGAAAACTGATACTGTTTTACCATCGCAAAAGCATGGTATGAATGATGAAGTGATGGAGACTGATACACATATTGATAGATCTATTAGTAAAACAAATAAAAGCAATTTGGTTAAACCCTCCCTGCTGCCATTCACTGGAAAGCAGTCTGCGCTTGCCAATACTGTTGACTTAGATGATTCATGGGCTTTAGATGACACTGGTGATGATTTTATGCTTGCTGTCAAGACCCCAGCCAAACATAACTTAAATCAGACCAATACACAAGTGACATTCACCCAAGCATTAGCATGTGTACATAGCTGTAGTAGCATAGAATCAGACAGCCACAGTGAAGATATGTCCATACACAGTGCTCATGTTCAAAATACACAGCCATTCTCCGCTGTAGAAACTATATCCACAACACATAAAATTGTTGATAATCAGCAGCTTGAAGATGTACAAAATGATGATGAAATTGAATCTGTATATGTTGATAGCATGTCTAATGCAACAGCACCACATAAACAAGGACAAGAAGTGGGAGATATTGATGAAGTTTGTGATACCAATACTATTGATCAGAAATGTACTGTAGAAAATCCAGCTCTAGAAACTGGTGATGATGCAGAGTCACCAGATTATATGAAATATCCAACTCAATCAGGTCAAAGAAACGTGATTAATACCATAGTTCCACAGGAAGAAGCGATCTGTAGGCCAAGTTCTCCAGATATGGACTTTGACCTACCAGAGTTTGATCTTGGGTTTGACCTTGATGACGAAATTGTCCCTCCATCACCAAATGCTACACAAACATCTCAGACGTCTGGGATCAGCAGGTTAAGTCAGGCATTTGGCAGTAGACTTAGCCAAAGTAGATGTGCTGCAGGAGATACTGCTGATGAAGATCAAGTAACTTCAAAAGATGCTTCTAGCAATGGGATTATTGGTTTAAAACCTGTGAATGGTATATTGGGCAAGTCATTGCTATGTAAGAGCAGAAGGTCACTGAAGTTGTTCAACAAATGTGACGCAAAAACAATTACAGGGAATGCGTATAAAACTTCAGATAGACAGAATGATAAACCTTATAGTGCTTTCCAAAAGGAAAATAATCATGATATTTCATGCAAAAGGTCTCGTGAACTCAGCTCTGACAATGATGATAGTTTTGTGGTAAGAAGGAAGAAGAAAGTTTGTGTAATTTCCTCTCCACTCAGCCAAGCCGTTAATACTGACAATGAATGTGATACGTCTGTCTGTATAAACACTGATGTAGCTGACTTGACAATTCCAATGAAAGGAAAACATACTATTGATAAAGGGAAACTAAAAATAAAACAAAGTAAGATGCCAGATGGTCTCTTGAGCAGTGATGAAGGTGATTTTGATGATTCAATTCTGTTGAGTAAGAACTCCCTTATAGTAGGAAAAAGAAAGGCTATTGCACTTCTGGATTCAGATGAGGATTTTGATGAACCAGTTACAAGGACTAAAGAGCATAGAGAAAAACATTCTGAGAAAACCCGGCACAAAGGGAATCATACAGACAATAATACTAGTAATACACATATGTCAAATTACAAGTATACAAATGTTAAAAAAAGTAAACCTTTGAGACTGTCCAATCCGTTTATTTGTGAGGAGGCAGAATTGAGTGATGAGGATGCTGAGCATGTGTCCGATGATGAAGCTGAACACAGTGACCTTGACACGTATGACAATAGTTTCATACACGACTCGCAGTTCGCCGAATCGCAGGCGTGCAGCCAAACTGACATGCAGGCTGTCTACCTGAAATCTGTCCAGAGCCCGAATGCTGGTGGCAGGAAGTACAAGTTGCAGTACGACCACAAGCATGTGGATGTGTTCTCTCAGGTACCACAGAAGGACGAGTCTGAGTATCTGGAGGATTCGTTCTGTGTGGGAGAGGAGGATGACGACTGGCTTGGTGGGTTGGAGGACGGCAGTGACGCGGAAGAAGTCACTCTGTACCAGCCAGAGGCCACAGTCTTACAGACTGGTCGCAAAAGGAGAAGGGGTGTGGGTAAATTCCTCGAAACTGGACGACAACGGGAGATTCGTGCTGGCAGAATGCGAGCGCTTGATGAAATAAAAGCCAGACTTGCTGGGAAGAATGCCAAAACCAATCAAATGAAATCAAAACCTGTTCTTTTGTCATCAAGTGATGATGAAGTTATAGAAAACGCTCCCAAAAGAAGTCGTATTCAAATGTTAGACGGCGATTCCTCCAGCGAAGAGGACACAAACATTATGTCAATAAGCAAAAGTCACATGAGCTCCACAGTGAATCGGACGTCCATTGTCAGAAAAACACGAAAGATATTTTCCAGTAGTGATGATGATGATGCAACTGATTTTATGCCAAAAGGCAATTTGAGTAAAGTGGTTGCTACCACTGGACCAAAAGGAGTGAATAAAATAGTTGGATCTAAACGAAATCTAACAGAAATACTACAAAATACCTTGAAAAGTACTA

Transcript

Conbi05517

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF16783	FANCM-MHF_bd	FANCM to MHF binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031879	Domain	Fanconi anemia group M protein, MHF binding domain	Interproscan
IPR039686	Domain	FANCM/Mph1-like, insert domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14025	FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000400	Molecular Function	four-way junction DNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0009378	Molecular Function	four-way junction helicase activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan
GO:0043138	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0045003	Biological Process	double-strand break repair via synthesis-dependent strand annealing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-