Gene detail

Detailed information of Conbi01651 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi01651	UNCHARACTERIZED	LG13	79063684	79091426	+

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi01651

ATGATGGACCTGGATGACGACGAGTGTACACCAGCAACTGATGGCACCATGGATGACATTCCTACCGCAGGAACGATGCCAACCGCTACTGAAGGGACAGTGACAAACATGGCAGCGATGCCGCCAGACAGATGTGGACCAGCCACTACTGAGTTTAACTTGAACAGGAAAATATTTGTTGACAACATCAGCTACAGGGTTGGCAGCAGGAAGCTATCTCGGTTCTTCAGGAAGTTTGGACCCGTGGAGTATTGTTATATTGTCAAGGATCACCTCAAGAGATGGTCTAAGGGGATGGCTTTTATTACCTTCAAGACAGAAGAGTCAATGAGGAATGCTCTACAGGCCTCGGGAGACCAACTGATCATTGATCAAAGGCAGATGCGGGTCCAGCCAGCAGAGATTTCGCACAAGGCCACATATTGGCAGTCACCCCCAGTGGCCAGGGAGATGGAGGGGGTGGAAGAGGATTGGGGCGTTGACCAGGCCAATCCAAACGAAGCTGGCGTTTACCTGGAACAAACAACAACAACAGACCCACACCCTGCCGCTGTAAGCACCAGAAATGGCGATCAATATTCCACGCGGACGAACATCGACGCCCTGTTTGATGAGCTGCTACTGGGGATTTTCAGCCGACTTACGATGAGAGAGAGGATCGGGGTGGAGCGGGTCTGTCGGCGCTGGCAACGGCTCGTACAGCAGTCCTGGATCACACAGCGCCACCTACACTTCCAGGGCTGCTTCAGGAGGTTTGACGGCTTGACGGACAGAACCCTCAACTCCGTGTTGTCCAAGTGTGGTCAGTACCTTCACTCCCTCGACCTGTCTGCGTCGCCACGGTTACTCACGGACTTCGCCATGGATATTATAGGGAAACACTGTCCAGATATCGAAAAACTTGACCTCTCCAATGTCAAGGTCACAAATATCTCCATGAGAAATTTGGTGAAGAAGTGTACCAAGTTGCAGTGGGTGCGATTACGAAGCTGCATATACCTCCAGGACAAAGGTATCCAGGACCTGTTGGGCGGCAGTCCAGACTTGCTGTATCTAGACGTCACAGACATGTTCAACTTAACAGGCCAGTGTTTCAAGGGTTTGGGGGAGAAAACAGAAACTGTCCTCGCTGTGAACTGTCACCAGCTACAAGACCGTGGGCTGCAGCACCTAGCCCGCCAAGCGCCCGGACTACTGGAACTTAACATGAACCAGTGTTGCCAACTGTCCGACGTCGCCATACACACCACCTGCCAGAATTTCACACACCTGAAGCGCCTGAACATCAGTGGAACACTGTCAAAAGTTACGAGTGGCGCCCTCTGTAATATACAACAACTGGGACACTTGGAGGAGCTTGTAGCCAGTTTTAACCCAGCCGTGACTGACCCAGTTCTGATTGCTGTAGCCGGTGCTTGTACCAACCTTAGGCAGCTGGATATAAGTGGGTGCTACCAGGGGGTGTCGGATGTCGGTGTCGCGGCACTTCGTAACCTTCGTGCCTTACACACACTCAATCTCAGCTACCTCAGTAAGGTGTCAGAAGTCAGTATGCTGACCTTATCACACAGTCTCAATGTGAAAAAGATGGTTGCCAGGGCGACCAAGTTCATAACAGATGAAGCGGTGATATCTCTGGTGAGCTCGTGGCCAGACCTTGACCACCTGGATGTGAGTGGATGTTTCCAGGTGACCAACGCCATATTTCAGGCCTTCAACGACAGTCCCGTGGACGCAAATAGACCCGTATATCTCTTCCTGGGAGGTACGTCGGTGGACTGGGTGTCCGAGGACATAGACTGGGTGACTGGGTTCTCCCATCTCAACGTGTCCATGCACAATCTTGCAATGGAGCAGCTACGGCCAGACCGAGACATCATTCTACCTGCAGATGATGACGACTATGAAGAGGAGCAGGAGTATGGTGATCATCCGCCACTCTCTAACTTTGAGGTCGATGCAGTTGACGAAAGTTACGACTGGCAGGATACGGATTACGATGAATACCTCGACAACGACGACCCACTGGAAGAAGAGAGGTGGGAGTTGTCATGA

Transcript

Conbi01651

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13318	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-