Gene detail

Detailed information of Conbi00521 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi00521	ALPHA-MANNOSIDASE	LG8	96138319	96144046	+

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi00521

ATGAGGATAATGCGCAAGTTCTTCGTCGGCAAGGTGGTCATTATCGGGGTGACGTTGTTCCTGCTGTTCTGGTTATTCAGCGGCGATCAACAAGGGAGGCCACTCCTGTTTATTAGTTCTGTCAAGTCGTCTGCAGCCGGTGCTTTGGAAACATCATTATGGACGCGGGACGCATGTCTATCGCTCATAGATACAATAAAAATAACTGCAAATTTTACATTGAATGACGTTTTAGACCAAATGAAACTATCATTCGTTGGAGGGTCATTATCAGCATCGCTGCTAAGTTTACCACATATGGTTGTCGCCAAACCGGAAATTCCGGTGTCTGCTAATCTGCGTGATGAAACGCTTGAAATAATAGTGATACCGCATTCTCACAACGACCCTGGCTGGCTTAAAACTTACGACGGATACTTCCGGGAGGATACGACTCACATCCTGTCACTAGCGGTGGAGAAGCTGCGCGAGTTCCCGGATATGACGTTTGTCTGGGTGGAAGCCTCGTTTCTGCAGACGTGGTGGGTGAACCAGACGGACGAGGTGAGATCGCAATTCCGGGCACTGGTGCAGAGCGGGCGCATCGAGCTGGTGTCGGGCAGCTATGTGGCGCCCGATGAGGCGTCGCCTCACTACTATGCCCTCGTCGATCAACTCATAGAAGGGCATTACTGGATAAAACGTAACATTGGCGTTATTCCGGAGACGTCGTTGTCGTTCGATCAGTTCGGTTACTCCGCCTCCATTCCGTACTTGATGAAGAAGAGCGGGCTGAAAAACGTACTAATCAAGCGCACCCACAGGGGCGTAAAACAGCTGTTCGGAGAGAAGCACTGGATGACCTTCAACTGGCGCCAGTTCTGGGACCCACACGGCAAAGACGATATATTCACACAGATTGATCCGTACGAGTGGATGAGCATATCTGACAGCTGCGGTCCTAGTAGGGAAATTTGCCGAGGGCTGGACTTCTCCACAATGCCAGACCTTCCAAAACCCGGCACCTTGGCCTCCAAAGTACCGTTCCGCATGGACATGATGTCGCGTCAGACGGCTTCAAATCTGCACGACTTCGCTAGAAAACTCGTTGGACAGTTCAGACTCAAAAACGGTAACTATAAACAGAAAGTGATGCTGCTGCCGCATGGCGGCGATTTTCATTACTCCAAAGCGGAGAACTGGGATCGTCAACACCGCAACATGAGGCTGTTTATGGACTATGTAAACGAACACAAGGACGAGTTTAACATACACATGCGGTTTGGTACATTTAAGGATTATTTTACGGAGGTAAAGCGGCAGACAACGAAACACAACCTGAGATATCCGGTTATTAGCGGTGATTTCTTCACATACACCGAGTCTAATGAATATTGGACGGGGTATTTTACAACTAGACAGTTTGACAAACGATTAGGGAGGGAGGTTCAGGAAAGCCTCCGGACAGCGGAACTGTTCGCCGCCATCGCTTTATCACATGCCAAAGAAAAGAAGGTACACAATACGGGTACTGTCTTTGAGAAAACTATTTTATCAAATCTCGTCATGGCGAGACGGAATCTCGGGATTTTCCAGCATCATGACGCAATCACGGGAACGTCACGTGCCCATGTTGCCATGGACTATGAAAAACGGCTAACGTTGAGTTTTACAGCGACACAGACTGTGATAGCCGCGGCGGTTGAATACCTGGTTGCCGACAACGAGGTCAGGCCTATGACCAGTGAGAATAAAATACTATCCACCCTCATCAGGAAGGGGTCGCGATTCAACGAATTAACGGCACGTGCGCCTGTGCAGGTGACGTCATCGGGTAAGAAACTATTTCTAGTGAACTCGTTACTGCAGAACAGACGTGAAGTCGTGTGGATAGCCGTGGATACGGATGACGTCATATTGCTAGATCACCATGGCAACGACGTTGGTTATGACATCATAGACGACGGTTACGGCACGTTTCAATTGCTCTTTGAGGCTAACCTTCCGCCTGTCAGTGTTCTGACATACTCCCTACAGCAGAAACCAAAATCATCTTTAGACCGACACGTGAGTCGGTATGAGCCAAAGGAAGATTCAATTGTCTGTGAAAACCAGCACGTAAATGTAACGTTCAGTAAGCTCAGAGGCACACCTTTACAAATGTGCTACAAGTCCCGAAACTTCTGTTCCTCGGTGGAGATCGACTGGCGATATTACAAAAGTGTTAGCGGCGCCTACACAATGAAGTCCAACGGTCAGCAGTCGAACGCGTATGGGGAAACATTGCCGAAGGTAAGCGTCGTCAACGGTGCGACGCTGTGCCGAGTTACGGCTACGTACGGATACTTCACCTCCGATATAACGTTGTTCAAAACGCGCGGTGTCGGTGGTAAGGCGTTGAGAATAAACATATACACCGACCTTAGGACATCAGGTGTTCAGTCAACACTGGCGACTGGGCAATTCAGTGGCGATTTCGCGATGAGAATCAAGTCTGACGTGAACAATAACCGAACATTTTATGTAGATTCAAACGGATTTCAATTAATGGGCCGAAAGTTCCGCCATTCATTGCCATTTGATGGAAATGTCTACCCAATGACGTCAATGTCCCTGATTGAAGACAGGAATACGCGTTTAGTTGTTCATTCCGCGCAGCCGCATGGAATCGTTAGTCCAACATCCGGTGTGCTCGATTTAATGATTGATCGAGCTGCATCGAGGCCGGAAATGGGACTGCCAGAAGGCGTCAGTGACCTTAAACCGACAAAAACTATTTTATACATCGAACTACAATCGGCCGGTGAGTATGAGCAGCCGACAACGAAGGAGACAGCTATTCCGTCGCTGCAGACGGTGTACCTTAACGACATCATTCAACATCCTGTGTACTCATTTTACTCGCTGGATAAATTGATGACATCAGATTCAGCACGTAGTTATTTAACGACGCCCCTTTCGTGCGATATCACGTTAGCCAATGTGAAGAATCTCGCCTCTGATTCGTTTATATCGGAGGGGACGTCACTGACATTCCATCGACGGGGTTTGTCGTGCGACAACAGCACGCAGGAACAATTGTGTCCACTATTCAAGGACATCTCATTCTCACCACGTAGTGTACTGAGTACGACGTCACATAGCGCCGTGGAGCGCATGTCGCTGTCACACCTGATGGAACAGGGTAACCAGGGAAACAGTCGCGTGCAGCTGGAACCAATGGACATAGAGACATTCAGATTGTCCTAA

Transcript

Conbi00521

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01074	Glyco_hydro_38N	Glycosyl hydrolases family 38 N-terminal domain	Domain	Interproscan
PF07748	Glyco_hydro_38C	Glycosyl hydrolases family 38 C-terminal domain	Domain	Interproscan
PF09261	Alpha-mann_mid	Alpha mannosidase middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000602	Domain	Glycoside hydrolase family 38, N-terminal domain	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR011330	Homologous_superfamily	Glycoside hydrolase/deacetylase, beta/alpha-barrel	Interproscan
IPR011682	Domain	Glycosyl hydrolase family 38, C-terminal	Interproscan
IPR015341	Domain	Glycoside hydrolase family 38, central domain	Interproscan
IPR027291	Homologous_superfamily	Glycoside hydrolase 38, N-terminal domain superfamily	Interproscan
IPR028995	Homologous_superfamily	Glycoside hydrolase families 57/38, central domain superfamily	Interproscan
IPR037094	Homologous_superfamily	Glycoside hydrolase family 38, central domain superfamily	Interproscan
IPR050843	Family	Glycosyl Hydrolase Family 38	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11607	ALPHA-MANNOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004559	Molecular Function	alpha-mannosidase activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006013	Biological Process	mannose metabolic process	Interproscan
GO:0006491	Biological Process	N-glycan processing	Interproscan
GO:0006517	Biological Process	protein deglycosylation	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-