Detailed information of Clavulariidae_g2311 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2311RNA-BINDING PROTEIN RELATEDctg00005217124791730939-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013KH_1KH domainDomainInterproscan
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF16544STAR_dimerHomodimerisation region of STAR domain proteinDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR023780DomainChromo domainInterproscan
IPR032377DomainSTAR protein, homodimerisation regionInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR045071FamilyKH domain-containing BBP-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11208RNA-BINDING PROTEIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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