Detailed information of Clavulariidae_g19798 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g19798NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1ctg000444375497392741-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01344Kelch_1Kelch motifRepeatInterproscan
PF13418Kelch_4Galactose oxidase, central domainRepeatInterproscan
PF16201NopRA1Nucleolar pre-ribosomal-associated protein 1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006652RepeatKelch repeat type 1Interproscan
IPR011043Homologous_superfamilyGalactose oxidase/kelch, beta-propellerInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR032436DomainNucleolar pre-ribosomal-associated protein 1, C-terminal domainInterproscan
IPR039844FamilyNucleolar pre-ribosomal-associated protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP