Detailed information of Clavulariidae_g19241 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g19241TRANSPOSASE, PUTATIVE-RELATEDctg000428930900941847+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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