Detailed information of Clavulariidae_g1920 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g1920PROLYL-TRNA SYNTHETASEctg00004625267822616993+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00043GST_CGlutathione S-transferase, C-terminal domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00458WHEP-TRSWHEP-TRS domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00749tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF03950tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF09180ProRS-C_1Prolyl-tRNA synthetase, C-terminalDomainInterproscan
PF09294Interfer-bindInterferon-alpha/beta receptor, fibronectin type IIIDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF15711ILEIInterleukin-like EMT inducerDomainInterproscan
PF20974tRNA-synt_1c_C2tRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000738DomainWHEP-TRS domainInterproscan
IPR000924FamilyGlutamyl/glutaminyl-tRNA synthetaseInterproscan
IPR000998DomainMAM domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR004046DomainGlutathione S-transferase, C-terminalInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR004499FamilyProline-tRNA ligase, class IIa, archaeal-typeInterproscan
IPR004526FamilyGlutamyl-tRNA synthetase, archaeal/eukaryotic cytosolicInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR009068Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR010987DomainGlutathione S-transferase, C-terminal-likeInterproscan
IPR011035Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR015373DomainInterferon/interleukin receptor domainInterproscan
IPR016061DomainProline-tRNA ligase, class II, C-terminalInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR017449Homologous_superfamilyProlyl-tRNA synthetase, class IIInterproscan
IPR020056Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR020058DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR020059DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR020061Homologous_superfamilyGlutamine-tRNA ligase, alpha-bundle domain superfamilyInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR033721DomainProlyl-tRNA synthetase, catalytic domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR039477DomainILEI/PANDER domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR049437DomaintRNA synthetases class I (E and Q), anti-codon binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43382PROLYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004818Molecular Functionglutamate-tRNA ligase activityInterproscan
GO:0004827Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006424Biological Processglutamyl-tRNA aminoacylationInterproscan
GO:0006433Biological Processprolyl-tRNA aminoacylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP