| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| Clavulariidae_g17911 | COLLAGEN ALPHA | ctg000370 | 4292568 | 4304996 | + |
| CDS | |||||
| Clavulariidae_g17911 | |||||
| Transcript |
| Clavulariidae_g17911 |
| Protein |
| Clavulariidae_g17911 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF03803 | Scramblase | Scramblase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005552 | Family | Scramblase | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0017121 | Biological Process | plasma membrane phospholipid scrambling | Interproscan |
| GO:0017128 | Molecular Function | phospholipid scramblase activity | Interproscan |
| GO:0030020 | Molecular Function | extracellular matrix structural constituent conferring tensile strength | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
