Gene detail

Detailed information of Clavulariidae_g15940 in Trachythela sp. YZ-2020 Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Clavulariidae_g15940	PROTEIN CBG26694	ctg000308	3360583	3368030	+

Gene Structure

More details in Jbrowse Sequence

CDS

Clavulariidae_g15940

atGGCCACTGCGCCTCTAGTACACCCGATGCCTCCTTTCGATCCAGATTCGGATATTGGCGCCAATATCGGTCCTAAACGGAAAACATGGCTCGAAGATTTTGACATGTATATCACAGCCAACGGAATTACCGACAAGAAAAAGAAACGAGACTTTGAAATTTTACTCCAGATAGTGTTATGTGGATCCTCTACCCGACTGAGAAAAAAAGCATTAAGCGATCCTAAACTCACATTAAAGGACATACTAATTATCGGCCGACAATTTGAGCGTAGTGAACAACAAACCGCAGAGATCGAGGACAGTTTAAAACAGGAAAACAATCCAACCGAGGACTCAGCCCTGTATGCAGTTCGTGATACTAAAAACCCGGCGGAGAAACCCGGCAGGTCAATTTGCAGAAATTATGGGGGAGAGTGGCCACATAAAAACGGACAATGCCCAGCGAAAGGCAAAGAGTGCCGTAAGTGTTTGAAATTAAACCACTTTGCAAGAGTATGTCGTTCTTCGAGACAAAGCCAAGGACAAAACATTCGACCTCTTGACACCTCCGACAATAACAGCCAATCGGGTGGCTCGAACAGTTATTGCTATGCTGTCAACAATGGAAATAATCGAAATCCAGTCACAAAGCTAAAGATAAACAATCGAAACATCAAGTTTACAGTTGATACAGGGTCTAGTATCAATGTGATTGATCAACAAACATTCAGTAAACTTGGAAACATCAAACTTGCAACAACTAACATCAAAGCATATGCTTTTAATTCCAAAGAACCGGTTAAAATGAAAGGCAAATTCACGACGACAGTAGAATCCAGGCGCAAAATAACTATCGCGACGATATATGTGACAGAGGACAATGGGGCTTGTTTGTTGAATGGAAATACAGCCAAAGAGATTGGACTAATCAGTTTACATTTGAATGCTGTGCATGCCCCACTGCAGTCACAAGGGGATGCTAAACATGCTGACATCAAAGATAAAGGCGTACAGAACATCGTACGAAATCATGCAAACATTTTTAATGGCTTGGGCAAGCTAAAAAATCGGAAATTTGAATTACTTGTTGACAAGAATGTAAAGCCTGTCGCTCAGCAACAACATCGTATCCCGTTTCATTTGCGAGCGAAAGTTGACAACGAATTAAGCCACCTATTGGAAGAGGACATTATTGAAAGGGTACCAGACACTGAAGCCACAGAGTGGATTTCACCTGTTGTGATAGTTCCTAAAAAGGATGACAACATTTGGTTATGCGTAGGCATGAGGGCTGCAAACACAGCCATAAAACGGGTCTTTGGACCAACATATGAAGCACACAGTCGAGCACTAGATGAATGTTTACAACGCCTTGAGGACCATGGTTTAACTGTGAACTTTGACAAATGCAGTTTTCTTAAATCAACCTTGGAATTTTTCGGCCTCATCTTCTCAAAAGACGGTGTTTGCCCCGATCCGAAGAAAGTTTCTGTTTTTGCTAATACAGCTACACCAAATACCATCAGCGAAGTTCGCAGTCTTCTAGGGATGGCTAATTACAGTGCCCAATTCATCCCAGACTTCGCGACAATAACCGAGCCATTGCGCCAGCTTACTCATAAAGGAACAAAGTTTCGGTGGGACAGTGAGCATGAAAACGCCTATCAGAAAATTCGACATGCCTTAAGTTACTTTGATATCCATAAAGAAACAGAACTCTCAGTTGATGCCAGCCCAGTTGGGGTGTCCGCAATTTTGGCTCAGAAAGATTCAGCTGTGCCACCAGCACTAACCGTGAGTGAGGTGGGTGAAGCCACCAGTAACGATGCTGTGCTTTGTTTGCTACGAGAGGCTATCCAAACTGGACGATGGTCCAACCGCAAATTGAAAcagtttaaactaattaaagaTGACCTATCTATTGACTATGACAATAAGGCAAAGGGACATCAAGGACAGGCAAAAACTAAGTCATTGCTACGAGAACATGTCTGGTTTCCTGACATGGACAAGGCGGTTAAAGCAGAACTAGATCACTGTCTTGTTTGCCAGGCAACATCACAACAAAATCCACCAGAACCTCTACGGTCATCACCACTACCTGGTTGCGCTTGGGACAAACTCAAGATAGACTTTTACGGACCTTTGCCATCAGGACAGTACAATCTAGTGATTATCGACTGTTATTCAGGATTTCCTGAAGTCGAAATCCTAACCTCAATATCTGCTAGGAGCGTCATCCCAAGGCTTGACTCTGTAGTCGCCCGACATGGGGTCCCATCCCAAGTCATCTCTGACAACGGCCCACCCTTCCAAAGTAACGAATTCCACCGGGAATACAGCACACCACTTCGACACCCCTCTGGCCTCAAGGAAACTCGGAGATCAACACCCCATTCAACCACCAAAATACCACCGGCGCAGTTATTGTACAATCGAGAAATTCGTGGAAAGCTACCATCACTACCTCGAAATAGTAAAGTGATTGACAGACATAATGAAGCGAGACAAAATGATGAACAGCAAAAGAAACGGGGCAGAACATACGCTGATGCACGGCGACGGACACACCCGAGTAACATTAGCGTCGGGGATACTGTGTTGTTTAAGCAGAAGAAAAGAAACAAgttttcaactaacttttcgtCAACCCCGTATAGAGTAGTTCGGGGCAAAGGATCTAAGATTGTCGCTAGGAATGGCAGACACTATATCACACGCAATGCTTCATTCTTCAAAAAGATTGAGGGGAGAGTGGAGAGTGAAGACGATGAAATTCACATTCATCAAAAGGATCAGACACtgatacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacacaaccacaacaacaacaagaaccaGAACAACAAGACGTGGTTCAGCCGAGAAGATCCATACGAAACCGGGTCCAAACAAAATCATTTTCCCAAGCTGGACAGGCTGCCTCTACGAGCTAGTGCATCGTTCACTGATGGTACATTTTTTATTACCATCGGCACTGACAATGTTCAAGTAGCACGAGAAGTGTGCAAAACTGTAACTACACTAGGACTAGGTCTAGGTGCtttatattttggttataaAGTATTAAGACCATTAATCGAGGGTGCAGTTAGAAATGGTGTTGGTGGTGAACGAGATGACCAAGAAGTTCGAGAAATTCGACCAGGATCTTTGCATGTTATattacattgttttacagacgAGAGATTTTTAGAAGTTTTAGCAGATTATGAATCGGGAAAGATGGAAAAACGCTTACAGGAAGAATTTTCGCAGATTGGAATTAAAGTGGAAGGACAGAAGGTGGAGATTGGAAACATGGTGGAGAAGTCAACATTAGAATCAAAACAAGAAGCTTTAAAAGTCAGATTAGACCTGTATGGAGAAGATCATTCCAAAACTGCTCGAACTTATAACAGCATCGGAATCACACAACACGAGATGCAAAActacaagtcagcattagagttACATCAATATGCTCTTCAGATCAGATTAAAATTGTATGGAGAAGATCAGTCTGATTCTGCTCAAAGTTATCACGAAATTGGAGTTACACAACATGAgatgaaagattacaagtcagccTTAGAGTCGTATAAACAAGCTTTacaaatcagattaaaactgtaTGGGGAAGATCATCTTGACATTGCTGAAAGTTATGATGCCTTTAGAGTGACACAAACGAGATCAAAGATTACAAGTCAGTATTAG

Transcript

Clavulariidae_g15940

atGGCCACTGCGCCTCTAGTACACCCGATGCCTCCTTTCGATCCAGATTCGGATATTGGCGCCAATATCGGTCCTAAACGGAAAACATGGCTCGAAGATTTTGACATGTATATCACAGCCAACGGAATTACCGACAAGAAAAAGAAACGAGGTTTGCTTTTATACCAAGCAGGCACCCGGGTTCGTGAAATATTACGGCAGTCGAGAAACTGAACGAGTATTTCGAGCCACAAAAACACCGTTTGTACGAAGTGTACAGATTTCGCGAAGCCCGCCAAGGAAGCACTGAAACCTTAGATCAATACTACAgaggcgtaggaacgtattcaatattgggggggccgaaGCTCACGAGGCggcaccatggttggcgccgagcgaaaaattttaaatttgaagcccccagatcgccggaaacggccgtttcagagtcttatctacctcttttagttagcttgttcaggaaactaagctgtttccatcattttcatgaaaattattttattttttggggggccgaaagatattccggccccccctcatataatattggggggcgCGGCCCCCCGGCCctcccgcttcctacgccactgcaaTACTACACGCGTCTACGAAGCCTGTCATCTCGCTGTGAATTTGCTGATGCAGACTTTGAAATTTTACTCCAGATAGTGTTATGTGGATCCTCTACCCGACTGAGAAAAAAAGCATTAAGCGATCCTAAACTCACATTAAAGGACATACTAATTATCGGCCGACAATTTGAGCGTAGTGAACAACAAACCGCAGAGATCGAGGACAGTTTAAAACAGGAAAACAATCCAACCGAGGACTCAGCCCTGTATGCAGTTCGTGATACTAAAAACCCGGCGGAGAAACCCGGCAGGTCAATTTGCAGAAATTATGGGGGAGAGTGGCCACATAAAAACGGACAATGCCCAGCGAAAGGCAAAGAGTGCCGTAAGTGTTTGAAATTAAACCACTTTGCAAGAGTATGTCGTTCTTCGAGACAAAGCCAAGGACAAAACATTCGACCTCTTGACACCTCCGACAATAACAGCCAATCGGGTGGCTCGAACAGTTATTGCTATGCTGTCAACAATGGAAATAATCGAAATCCAGTCACAAAGCTAAAGATAAACAATCGAAACATCAAGTTTACAGTTGATACAGGGTCTAGTATCAATGTGATTGATCAACAAACATTCAGTAAACTTGGAAACATCAAACTTGCAACAACTAACATCAAAGCATATGCTTTTAATTCCAAAGAACCGGTTAAAATGAAAGGCAAATTCACGACGACAGTAGAATCCAGGCGCAAAATAACTATCGCGACGATATATGTGACAGAGGACAATGGGGCTTGTTTGTTGAATGGAAATACAGCCAAAGAGATTGGACTAATCAGTTTACATTTGAATGCTGTGCATGCCCCACTGCAGTCACAAGGGGATGCTAAACATGCTGACATCAAAGATAAAGGCGTACAGAACATCGTACGAAATCATGCAAACATTTTTAATGGCTTGGGCAAGCTAAAAAATCGGAAATTTGAATTACTTGTTGACAAGAATGTAAAGCCTGTCGCTCAGCAACAACATCGTATCCCGTTTCATTTGCGAGCGAAAGTTGACAACGAATTAAGCCACCTATTGGAAGAGGACATTATTGAAAGGGTACCAGACACTGAAGCCACAGAGTGGATTTCACCTGTTGTGATAGTTCCTAAAAAGGATGACAACATTTGGTTATGCGTAGGCATGAGGGCTGCAAACACAGCCATAAAACGGGTTCGGCACCCAATACCAACCGTGCATGACATTTCTCTAGAATTAAGTTTTTCACCAAACTAGATCTGACACAAGCATACCACCAGCTTGAACTATCCCCGTCTAGCCGACAAATCACCACGTTTATTACACACTCTGGGCTTTACCGGTATAAACGGTTAAATTACGGAACAAATTCAGCTGCAGAAATTTTTCAGCATGCATTGCAGCAAATTTTACATGACATTCCAGGGGTTAAGAATATCGCAGATGACATAGGTCTTTGGACCAACATATGAAGCACACAGTCGAGCACTAGATGAATGTTTACAACGCCTTGAGGACCATGGTTTAACTGTGAACTTTGACAAATGCAGTTTTCTTAAATCAACCTTGGAATTTTTCGGCCTCATCTTCTCAAAAGACGGTGTTTGCCCCGATCCGAAGAAAGTTTCTGTTTTTGCTAATACAGCTACACCAAATACCATCAGCGAAGTTCGCAGTCTTCTAGGGATGGCTAATTACAGTGCCCAATTCATCCCAGACTTCGCGACAATAACCGAGCCATTGCGCCAGCTTACTCATAAAGGAACAAAGTTTCGGTGGGACAGTGAGCATGAAAACGCCTATCAGAAAATTCGACATGCCTTAAGTTACTTTGATATCCATAAAGAAACAGAACTCTCAGTTGATGCCAGCCCAGTTGGGGTGTCCGCAATTTTGGCTCAGAAAGATTCAGGTACGTCCACACCTCACATTATTGCATATGCTATAGTCGTGCCCTCACCCCGACAGAGAGGCGGTACTCCCAAACCGAAAAGGAGGCACTAGCGATTGTCTGGGGCATAGAACACTTCCACCTATATCTATATGGTGCCTCTTTCACTTTATATACTGACCACAAAGCACTGGAAGTAATCTTTGGTAACCCTGTCTCTAAACCACCCGCTAGAATTGAACGGTGGCTGTTGCGTCTGCAGCTGTATGATTTTCGAGTTATGTATAAACGTGGGAGTCAAAACTCAGCTGACTTCCTGTCGCGACACCCGGTACCTAGGACCAAACCTCAAACAAACGTAGCGGACACATACGTCAATTTTCTAACTATCACAGCTGTGCCACCAGCACTAACCGTGAGTGAGGTGGGTGAAGCCACCAGTAACGATGCTGTGCTTTGTTTGCTACGAGAGGCTATCCAAACTGGACGATGGTCCAACCGCAAATTGAAAcagtttaaactaattaaagaTGACCTATCTATTGACTATGACAATAAGGTATTGCTTCGTGGTACTCGGATTGTAATACCTGCTTCCCTTACAAAACATGTAATACAAATCAAGGACAGGCAAAGGGACATCAAGGACAGGCAAAAACTAAGTCATTGCTACGAGAACATGTCTGGTTTCCTGACATGGACAAGGCGGTTAAAGCAGAACTAGATCACTGTCTTGTTTGCCAGGCAACATCACAACAAAATCCACCAGAACCTCTACGGTCATCACCACTACCTGGTTGCGCTTGGGACAAACTCAAGATAGACTTTTACGGACCTTTGCCATCAGGACAGTACAATCTAGTGATTATCGACTGTTATTCAGGATTTCCTGAAGTCGAAATCCTAACCTCAATATCTGCTAGGAGCGTCATCCCAAGGCTTGACTCTGTAGTCGCCCGACATGGGGTCCCATCCCAAGTCATCTCTGACAACGGCCCACCCTTCCAAAGTAACGAATTCCACCGGGAATACAGCACACCACTTCGACACCCCTCTGGCCTCAAGGAAACTCGGAGGTAGAGGCTTTCATGAAACCCTTGGGCAAGGCTATTCGAACAGCAAATTTGGAAGGTCGGCCATGGCGTCAAGAATTATCAAAGTTTCTGCTGACATATAGATCAACACCCCATTCAACCACCAAAATACCACCGGCGCAGTTATTGTACAATCGAGAAATTCGTGGAAAGCTACCATCACTACCTCGAAATAGTAAAGTGATTGACAGACATAATGAAGCGAGACAAAATGATGAACAGCAAAAGAAACGGGGCAGAACATACGCTGATGCACGGCGACGGACACACCCGAGTAACATTAGCGTCGGGGATACTGTGTTGTTTAAGCAGAAGAAAAGAAACAAgttttcaactaacttttcgtCAACCCCGTATAGAGTAGTTCGGGGCAAAGGATCTAAGATTGTCGCTAGGAATGGCAGACACTATATCACACGCAATGCTTCATTCTTCAAAAAGATTGAGGGGAGAGTGGAGAGTGAAGACGATGAAATTCACATTCATCAAAAGGATCAGACACtgatacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacacaaccacaacaacaacaagaaccaGAACAACAAGACGTGGTTCAGCCGAGAAGATCCATACGAAACCGGGTCCAAACAAGTCTATTTGGACAtccaataaactcttcattaatTCATTAGAGAACTGAAACACAGGAACATTATCTAATAGTTACATTTGGTTTTATATTCAAGTTTATTTAAGTTTATCTTTTTGGAGACTGTTTTTGTTCAAAACGGGGGTGATGTAGTGATGACGTCACCTACTTGTTAGATCCCCCGGGGGCGTAAGGAGTTGAACAAGCATGGCggtcatgcattactgtaggtcAAACTGTGTATAGATATATACGATATAGATTACAATAAAAGAACATTACAAGCAGTTTGAAACAATTTCAGTACCTTCGCACAAACTCTTCAGTCTTTTGCCACCAAGACATTGTCCCAACCTTAATCTTCGTAAGTGTCATGAGTATGATCTTCCACAAATTCATACGGACAGATTCAAACATTCTTTCATCCCAGCGATGTGTgtgaagaaattttcaaaagcCTAACTTAATTTTAACAATTCTTAGATTTTATTTACgagtatttttattgtaatatactaaccatatataaattaatattgatattttcaacacttgtaaatacaaattacgcaattcagccgTCTGGCTGCTATGTATAATTCTGCTTCTAACTATCTAACTAACTATCTATCTAAAACTAGCGGTGTACTAGCTGTCTAGTATAAATGTTGATACACTTTTACAGTCGGTATCCAGCAGGGGAGTTAactaaacatttttcaaacaattAATCTGAGTATCATTAAAATAAAGActatacatattatattataagacATGTCTTCAAAAAAATTCACAAACACTGTTGCCATTGAGGAAAGTTGTTTTTGATATGGGAAGATTTATGAGTATAGTATAGAGTATAGTAAACTATACATCtttaggtttaggtttatgcaagaCAGTAGACAAACCATCGTGtttcaaaataaaaacaatGCATATATTAGTTATACTGTAAGCGGGCACAGATTTTGTCATTTGTAAATACTCGATTGCTTGTGtcaatgcatcagtcaaatccaagcgtgcccatcccgcCCCACTGCATGGCATTTTTCATTTCCCAGCGTAAAGGTTTGGCATGGTTATTTGACTCAAACCTTTGCCCGGGGCGAGGCATTTTGAAGAAATTAAGGATTTGTTTTATTATCAATCATAACTaacttgataataatataaaaacaaacaatactagtttcagaacatttaataaattaatgttgtaatatatatatatatagtttttttttttttaaaaaaaaaacagcACACAGTTTTTTCcgtttttttgaaaaaaaacaaaaaaactatatctatgctatatattatatatgagcacttgtttttgttttgtaaaaaaaaaaaggtatatatatataatatatatatagtacaacaTACATACATGCCCAGGTGTCCATCTCTATATTATGTTCATGTTTTTGGATAATCCTACTTTCTAGCCAAACAGTCCAGCTGTCCCAGGGTGGGGAGGATTGGTGGGGATTACCCGCATTTCCACTTATTTTTATCCCCCTCCCCGGGAATTTTTCGGGAATTGAAAACAATCAAAGCACGGGTTCAAGGGGGGTGTGGTGATGGGGGATGACTGATGCATGAGCACCACAAGCTAACATCCCTAATGCATGTAAACTGTTTGCAagttaatattttattttcataaataaaatgaattgatGAGGTCTATAAGGGCCTGTTCGTAAGATCCCGCTttccgagacgtctcgcctagcgggacgaatatttctgtgtgttcatatggagtttttcatcccgctAGCCGAGATGAATTAcaatgtttttttgtttttgcaataaaaagcattggtttagcaacatatttgatgcttgattgtaaaacaaacataaaactacgtcaAATTAAaaggcaaaatcggaaatttggtttctcgatttcaataataaatgcaaactaaaaatatatgtaGTGTCAGTAGTTTATAAGACCATGACCACCGATACTGAAACGCCAGCAAGTCCCAAATAGTGGCTAGCAGCTGACCActtttaaagaccatgtaaagtccattctgcgcatgttctataggggtcccgcgatgtaaacaatgcccaaatatCGCGTTGATTCGaataaaattcgacatcttctaaatcagaaactcgaatctgtatctatttaaagcatagcgaaccagaacacatcatatttttttaaatataacgtgtttaaaatgtaaacaaacggacgttgccggtttgtttacattgggactttacatcacctttaattttatttataggACAAACTTTTAATGGCAGAATCATTTTCCCAAGCTGGACAGGCTGCCTCTACGAGCTAGTGCATCGTTCACTGATGGTACATTTTTTATTACCATCGGCACTGACAATGTTCAAGTAGCACGAGAAGTGTGCAAAACTGTAACTACACTAGGACTAGGTCTAGGTGCtttatattttggttataaAGTATTAAGACCATTAATCGAGGGTGCAGTTAGAAATGGTGTTGGTGGTGAACGAGATGACCAAGAAGTTCGAGAAATTCGACCAGGATCTTTGCATGTTATattacattgttttacagacgAGAGATTTTTAGAAGTTTTAGCAGATTATGAATCGGGAAAGATGGAAAAACGCTTACAGGAAGAATTTTCGCAGATTGGAATTAAAGTGGAAGGACAGAAGGTGGAGATTGGAAACATGGTGGAGGTGAACGAAACAAAggaagctataaacgaaaggtATGATAGATGTTTTATAAAAATACTCAGAAGTCAACATTAGAATCAAAACAAGAAGCTTTAAAAGTCAGATTAGACCTGTATGGAGAAGATCATTCCAAAACTGCTCGAACTTATAACAGCATCGGAATCACACAACACGAGATGCAAAActacaagtcagcattagagttACATCAATATGCTCTTCAGATCAGATTAAAATTGTATGGAGAAGATCAGTCTGATTCTGCTCAAAGTTATCACGAAATTGGAGTTACACAACATGAgatgaaagattacaagtcagccTTAGAGTCGTATAAACAAGCTTTacaaatcagattaaaactgtaTGGGGAAGATCATCTTGACATTGCTGAAAGTTATGATGCCTTTAGAGTGACACAAACGAGATCAAAGATTACAAGTCAGTATTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-