Detailed information of Clavulariidae_g15628 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g15628U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4ctg00030722884512297550-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00625Guanylate_kinGuanylate kinaseDomainInterproscan
PF04427BrixBrix domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR007109DomainBrix domainInterproscan
IPR008144DomainGuanylate kinase-like domainInterproscan
IPR008145DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR020590Conserved_siteGuanylate kinase, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR044281FamilyU3 snoRNP protein/Ribosome production factor 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22734U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034457Cellular ComponentMpp10 complexInterproscan
GO:0042134Molecular FunctionrRNA primary transcript bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP