Detailed information of Clavulariidae_g13944 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g13944KU AUTOANTIGEN DNA HELICASEctg00028332747523341199-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01974tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan
PF02735KuKu70/Ku80 beta-barrel domainDomainInterproscan
PF03731Ku_NKu70/Ku80 N-terminal alpha/beta domainDomainInterproscan
PF08785Ku_PK_bindKu C terminal domain likeDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003347DomainJmjC domainInterproscan
IPR005161DomainKu70/Ku80, N-terminal alpha/betaInterproscan
IPR006164DomainKu70/Ku80 beta-barrel domainInterproscan
IPR006677DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR011856Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR014893DomainKu, C-terminalInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR024193FamilyKu80Interproscan
IPR036167Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036494Homologous_superfamilyKu, C-terminal domain superfamilyInterproscan
IPR041667DomainCupin-like domain 8Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12604KU AUTOANTIGEN DNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000213Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0043564Cellular ComponentKu70:Ku80 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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