Detailed information of Clavulariidae_g13549 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g13549ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTICctg0002772214325992-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01040UbiAUbiA prenyltransferase familyFamilyInterproscan
PF14489QueFQueF-like proteinDomainInterproscan
PF14819QueF_NNitrile reductase, 7-cyano-7-deazaguanine-reductase N-termDomainInterproscan
PF17191RecG_wedgeRecG wedge domainDomainInterproscan
PF19833RecG_dom3_CATP-dependent DNA helicase RecG, domain 3, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000537FamilyUbiA prenyltransferase familyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR004609FamilyATP-dependent DNA helicase RecGInterproscan
IPR006370Family4-hydroxybenzoate polyprenyltransferase-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR016428FamilyNADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029139DomainNADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminalInterproscan
IPR029500FamilyNADPH-dependent 7-cyano-7-deazaguanine reductase QueFInterproscan
IPR030470Conserved_siteUbiA prenyltransferase conserved siteInterproscan
IPR033454DomainRecG, wedge domainInterproscan
IPR039653FamilyPrenyltransferaseInterproscan
IPR043133Homologous_superfamilyGTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductaseInterproscan
IPR044878Homologous_superfamilyUbiA prenyltransferase superfamilyInterproscan
IPR045562DomainATP-dependent DNA helicase RecG, domain 3, C-terminalInterproscan
IPR047112FamilyATP-dependent DNA helicase RecG/Transcription-repair-coupling factorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47964ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTICInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0004659Molecular Functionprenyltransferase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0008616Biological Processqueuosine biosynthetic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0033739Molecular FunctionpreQ1 synthase activityInterproscan
GO:0046857Molecular Functionoxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptorInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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