Gene detail

Detailed information of Clavulariidae_g13537 in Trachythela sp. YZ-2020 Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Clavulariidae_g13537	AMINOHYDROLASE SSNA-RELATED	ctg000277	1317	3375	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Clavulariidae_g13537

ATGGAACGGCATCCGCTTTCCAGCCAGGCATTTATACCAATGGATAGTAAACCTTTCCTGGTATTGGTCGCGCCATTCGGAGAAACGGTTGCACCGGAAGATCTGCATTTGTTTCTTAGTAATGGTAAACAAGGTGTCAATTATCATCGGGGTGTCTGGCATCATCCCGTTTTGGCTCTTAAAGAACAAACAGATTTTATAATAGTTGATCGCGGGGGTAATGGAGAGAATTGCGATGAGATCTATTTTGCTGAAGATAAAGATATTGTGATCAGTGacattaaatttgtttgaataTTGATCGAGTAATATATACCCGTGCTACTTGGAACTGCGTATTTATAGCACGCCCCTTTTCATCCATGGCCGCGTTGTTCCTCTTTGCAGGGAGCGACCATGCGCATCGTCGCGCCTTGCCCTGAATGCCTTGCCTTAATTGGAATGGGGACGCACTCTAAAAAACGCATTTCCAAGTATCACGGGTATATTAAAACCAGAGCAGTTTAAACTACGGTGTATTAGCCATTTTTGCAGCGAGATTCGTTCTCTGTAAGATGCCGAGCAGCATCGTCGATAACACGCGCTTACCCTGAAGGAATCTCAATCTATTCCATCCAGACTTAATCAGAGGTTCCTTATGATTAACGTATAGGAGAAAGCAGTGTCTACTTTATTAATTAAAAATGCCTCAGTCGTCGCTACCTTTGACGATGATCGTCgtgaaataaaaaatggcggACTTTTTATCCGCGACAATGTGATCGAACAAGTCGACGCCACGGATGAGTTACCGCAAACCGCTGATAAGATTCTTGATCTGAAAAATCATATCGTATTACCTGGTCTGGTAAATACACATCATCATTTTTATCAAACGTTAACCCGCGTGATCGCGCAAGATGCAGATCTATTTACCTGGTTAAAAACGCTCTATCCAATCTGGGCAAATCTAACCGATGAAGCAATATATATCAGCACACTCACGGCACTATCAGAATTGATGCTATCAGGTTGTACCACCAGTAGTGATCACCTTTATATTTTCCCTAACGATTGCACATTGGATAGCCAGATCAGAGCAGCTGGAGAGATTGGAATGCGCTTCCATGCATCTCGAGGCTCAATGTCATTGGGTGAAAGTAAGGGCGGGCTGCCACCGGATTCCGTTACAGAAAATGAGGAAGAAATTCTTAAAGATAGTCAGCGCTTAATAGAAACCTATCACGATAATGATCGTCACTCGATGTTACGTATGGTGCTAGCGCCCTGTTCGCCTTTTTCAGTGACGCCCGATCTGATGAAACAATCAGCAGAATTAGCCAGATCATATGCTGGCGTTCGTTTACATACGCATTTGGCTGAGACTATCGAAGAAGAACAATTTTGCATTGACACTTTCGGCAAACGACCAGTGGATTATGTCGAGTCTTTAGGTTGGGTAGGTGATGATGTTTGGCATGCACATTGTGTTCATATGAATGCTGATGAGATCCATCAATTTGCAACAACAGGTTGCGGTGTAGCACATTGTCCAAGTAGTAATATGCGTCTGGCCAGTGGCATTGCGCCGGTTGTCGCTTTGCGTGATGCTGGTGTCAAAGTTGGGCTGGGTGTCGATGGCTCTGCGTCTAATGATGGTAGCCATATGCTGGCTGAAACCCGACAAGCAATGTTGCTACAACGTGTTGCTCCAGATCGATACCTTAGTGAAAAGCCCGGTGGAAGAGGTGGGTTTGCTGGCAATGGTAGCAGTATGTCCGCGCGTCAGTCACTGGAACTGGCTACTCGGGGTGGTGCCTCTGTGTTGGGGCGTGATGATATTGGTCATCTTGCACCAGGGATGAGCGCGGATTTTATCGCCATTGATTTGAACCGTGTGGAGTACGCAGGTGCCTGGCATGATCCGCTGGCAGCCATTGTTTTTTGCCGGCCAGGTAATGTAGATCTCGCTGTGATTAACGGAAAAATAACGGTGCAAGATGGAGTATTACAAACAATGGAATCAGCATCTTTATTATCACGACACAATGAAATTTCTATGGAGATGATCAATAACTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01979	Amidohydro_1	Amidohydrolase family	Domain	Interproscan
PF04115	Ureidogly_lyase	Ureidoglycolate lyase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006680	Domain	Amidohydrolase-related	Interproscan
IPR007247	Family	Ureidoglycolate lyase	Interproscan
IPR011051	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR011059	Homologous_superfamily	Metal-dependent hydrolase, composite domain superfamily	Interproscan
IPR024060	Homologous_superfamily	Ureidoglycolate lyase domain superfamily	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan
IPR047233	Domain	Ureidoglycolate amidohydrolase, cupin domain	Interproscan
IPR050287	Family	5-Methylthioadenosine/S-adenosylhomocysteine deaminase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43794	AMINOHYDROLASE SSNA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000256	Biological Process	allantoin catabolic process	Interproscan
GO:0004848	Molecular Function	ureidoglycolate hydrolase activity	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0016810	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	Interproscan
GO:0050385	Molecular Function	ureidoglycolate lyase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-