Detailed information of Clavulariidae_g13281 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g13281TRANSCRIPTION INTERMEDIARY FACTORctg000273153377175370+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001487DomainBromodomainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45915TRANSCRIPTION INTERMEDIARY FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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