Detailed information of Clavulariidae_g12700 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g12700PEROXISOMAL SARCOSINE OXIDASEctg0002569729671016796+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00616RasGAPGTPase-activator protein for Ras-like GTPaseFamilyInterproscan
PF01266DAOFAD dependent oxidoreductaseDomainInterproscan
PF13716CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR001936DomainRas GTPase-activating domainInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR006076DomainFAD dependent oxidoreductaseInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR034421DomainProbable RNA-binding protein 19, RNA recognition motif 6Interproscan
IPR034423DomainProbable RNA-binding protein 19, RNA recognition motif 5Interproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR045170FamilyMTOX familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10961PEROXISOMAL SARCOSINE OXIDASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0008115Molecular Functionsarcosine oxidase activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0033514Biological ProcessL-lysine catabolic process to acetyl-CoA via L-pipecolateInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan
GO:0050031Molecular FunctionL-pipecolate oxidase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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