Detailed information of Clavulariidae_g12255 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g12255DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]ctg000240561319620527+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF01180DHO_dhDihydroorotate dehydrogenaseDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF14691Fer4_20Dihydroprymidine dehydrogenase domain II, 4Fe-4S clusterDomainInterproscan
PF14697Fer4_214Fe-4S dicluster domainDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001295Conserved_siteDihydroorotate dehydrogenase, conserved siteInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR003029DomainS1 domainInterproscan
IPR005720DomainDihydroorotate dehydrogenase, catalyticInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR009051Homologous_superfamilyAlpha-helical ferredoxinInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR028261DomainDihydroprymidine dehydrogenase domain IIInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR044762DomainDHX8/ Prp22, DEXH-box helicase domainInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan
IPR049588DomainDHX8, GH2-like domainInterproscan
IPR049621DomainDHX8 helicase, S1 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43073DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0002058Molecular Functionuracil bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006212Biological Processuracil catabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0017113Molecular Functiondihydropyrimidine dehydrogenase (NADP+) activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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