Gene detail

Detailed information of Clavulariidae_g12248 in Trachythela sp. YZ-2020 Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Clavulariidae_g12248	LD33695P	ctg000240	407486	411899	-

Gene Structure

More details in Jbrowse Sequence

CDS

Clavulariidae_g12248

Transcript

Clavulariidae_g12248

ATGGATAGGTGCAACATTGAGCAATTTCTCaatgaaaatttgaatttcacCGAAGGGAGTAAGAATCAGAAATACTATTATCATTTCAAGTTAGGGCTGCAGTCATATTCCTTTAATCAGCATGAAGATGCTTTGGACCACTTTGAGAAAAGTTTAATTATAGCACAGGAGTTAGAAGACCGAACTCTACTAGAGTTTTTTGCATGTTATGGACTGCGATACTCTTATGCTTTGACTAATCGCTACGGACTAACCATCGAGTACTTCAATAAATGTATGGCTTTGACGGAACTTTTGGAAAGCAGTAGTTGTAATGGTAGTGAAAAATGTTTCGCTGCTTTTGCGTATATTGCATTAGGTGATGGCGAATTGTTTCGTGGTCGTTCCAAAACAGCAATAAAATTCTATAAAAATGGTTTAGAACTTGCTGCACAAATGCATGATAAAGAACGCGAGTTGATCGGATACCTAAGGCTAGGAGATGTATACAGGATTGTTTCTCAGTACACCAAAGCGTTGGAACATTATAAAAAGTGTTTGGAAAAAGATGAAGAAAAGCCTGAAAATCCGACTGTTTTACGAACACGTTTGCAAGCACAGCAGGGATTGGGCGATGTGTACAAGTTATCAGGGCAGTTCCCTAAAGCACTGAAACATTATGaagaaagtttgaaaatttCATTGGTATTAAATGACAAGTATCAAGAATCACTAACGTATGCAGCACTTGGAGATTTATGCAGACATGCTGGTCAGTGTACTAGAGCACTTGAATATTACAACAAGTGTTTAGAATTGGGTTTAGAACTATTTAATAGATCTATCGAATTCCGTGCATATCTAGGTATAGGGTATGTTTATCTTTTGACTGGAAAGTGTTTTGAGGCAAAAATGAATTTTGAGAAATGTTTCGAAATTGCGAAATATGCGATAAACATTTCGAGGCAACTTCGAAATTGGGACTTGGAGATGTATACAAGTTAACTGGAGATTATTCGAATGCAATGGAGTATTATGAACAATCATTAGGGATTGCTATAGAGGGAGAATTGCGCGACATCAAAGAAGCAGCTTTCTTAGgattaggaaatgcatgtacGGTGGCCGGTAAATGTTCCGAAGGATTACAGTATTTGGAGAAATGTTTGGGGCTCTCTGTGCAGATTGGAGATCAATATCATGAGTGCCAAGCGTATCTTGGGTTGGGAGATGTTGATATGTTTGAAGAAAGGTATGATGTAGCAATAGAAAACTATGGAAAAGGGTTGGATATTGCCGTTAAAATTAACGAAAGAAATTGTGAGTCTAGGGCAAAACGAAGTTTAGGTGATGCGCGCATATTGGTTTCACTAAACGAAGACGCTATAGACCTCTACCAAACAGCTTTAAGTATTGCTGAAGAAATTGACAATGTATATGAGAAATCGCGCAGCCATCTTGGGTTAGGAAAAGTATATAAATCAACTGGGAGCTATGAGGGAGCATTAGAACACTATCAAAAAGGATTTTCATTGGCTGCAGGAATGAATCCTGCAGAACATATGGGTGCAGATCAAATTGGGAATGATGAAAATGCAATCCAGTACATGAAGGGACTGCCGTTTGCGCACCTAATAGGGAACAAATTTGGAGCGTTAACAGGGTATTGGGAACTAGGAGATTTATACAATAAATTGAAAATGTATCACAAAGCGTTGGAACTTTTTGAAAGATACCTTGCAATTGCTGAGGAGACTAATGATTTGAAAGCGCAAGAAAGAGTATGCGAGCGTTTGGTAGATATATACAAGCAAGAAAGCCGATATTATATGGTGAAGCAGTTCCAACAGAAATTACAGGATATTGCCAAGGAACGAGAAAAAGCTAACTGTGGTATGTATGCAAATTGAATGCAGGATTTTGTGTGCAATTTTATTATATCGACCTACTCAAGTGCGCCgcattaatattttttgttccAATTCCTGCGTATCGTTAGGGGTGTTGGTGGCATTGCAGTGATTGCACAGTTGTTTGTGCATGTGCCCTTTGCCTCTGAACACGGAGTTCCAATCCTGCACTATGGAATTTTCTCATTTTAATTTCGCCTATAATTTTACCAAAACCTCGGGATTACTCCTTCAGGGAATTTTCTACCTGTGTAAAAAACTGGACCAGTTAAACATAGCCCTTATATTAGACCTCTAGCCACGTAGGACAACCATTTAGAACTGATGAATTTTCTAGATGAAAATTATGCTTTCCTAACGAGGAAACCTACTATTTTAGTATATATCAGTAAAGTAGTATTGGATTTTGGACATTTCATCCGCCTTTTCACTTCACCTCGCGTTTGCGTTTGCGATCGAGAGTAAACGCCTGTAACAGGCTACCTGGCCTGGCGTGATGAAGACGTTCGTTCGTCTGACGTTAATTTGAATTGATTTTTTAATGACTTGTTTGTCTTAAAAGAATCGTGCTCATGTCCCGTTTCACACTGGATGACTCGTCCGACTGAGACGTTTTGTCCGTCGTCAAGTGAATATGGCTAGGGTAAGTGCAGAATTGTACTCGTAGTCCCTGCTTGAGCGCCCTGTATTGCACACTATCTTACAGTCTGTACTAATTGAACCATTCATACTACTTTGTAGAAAGCCCAGAATCGTGGAAATGGGAAGAGAGTTCGATAACTCATCGAGATAAGTTCATAAAGTTACTGAAATATGGACAAGACCATCCGGATGAGGTCAAGGAAGTCAACGGTGTACGCGCTTGTTGCTCGAAGGACTTTCTCATTGGTATGGGAGGTGAAGGCACTCGAGTTTATGTAGGGTTAGGGAAAGATGGGTACGAGAGGGCTGTGAAACGTTTGCCCAGGGATGCTTGCGCTTGCTTAGCTGAACAAGAAAAGAAAGTTTTGAACGAACTCAACACAACCAAGTCAAACTATGTAGTGAATTATTGGTTTTTAGACGACAAATGCGATAAGGACTACCTATTCTTAATCTTAGATTTATGTGAGGAAACGTTGGAAAAATTTGTTAATCGTAGCAGTTCGGACGAACTGTTAACAACTGCGTCAGATATCATTCAGCAAGTTTTGAAAGGATTAGCTGATCTTCATCGTGATCCAAAGCCCATTTTGCATCGGGATTTGAAACCATCCAATATCTTGCGAAACATCCACGGCAAATGGTTGCTGGCAGACTTTGGTATGAGTCGAATCATGACGGGAGGTACCAGTACCCATCTAAGCAAGCAGAGAGGAACAAAACATTGGAGAGCCGTTGAATCGTATCCTTCCAATGGCATGTCTGACGATGATGAAGTACGCTACAAGAAAGAATCTGATATTCAGGTAGGCTTTCATTGATGACGGATACCATCATTACCAATTGCTTGGATTGTTTTAATGTTTGGGTTTTAGCGTTTGCGGAAGTAAACTGAACTTTTACTAAACAAATATCGACTCCCAAGTAAAATTCCACCGGAAAAAGGTTAATCATACTATTATTATAGTTACTGTAATCTCTATTTTTGAGCTTTCTCGACAGGGTTGCATTAATACTATTAGTGGTATAGTGTTTTACCTAACAAAAGGAATCTAATAAATAGGCCCTCAATCTTAAAAGCCTAAAACTTATGTTTATGATATTAGTTCTTTTGGGTCCAAATTGAGTATCCGAAAATATATCAGAATTTTGTCCGTATTACAGAGGTGCTCGTACGATGATTGTGTAATACTTAATTATAACCTGTAACTGCAATTTGCCTCTTTCATACTTAGGTAGCCGGAATGGTGGCATTCTATATTGTCGCTAAATGTCAACATCCCTTTTGAGAAGAAGCTGACCGGCTTCGCAACTTACTTGATGGTAACCCAGTTGGCTTGGATAAGTTGAAGAATCCTGTCTTGAAAGATTTGTTATCCTGGATGCTGAGCCATGATCCCTATGATCGACCGTCGGCGAGTGAAGCGCTAAAACACCCATTTCTTCAGCCCGCGGAGCAACAGTTTGAAATGCTGTGCAAAACAGGAAACCAACATGAGATCAAGACACGGGATATTTACTCGGATGTCGTGCGAAAGTTGAATAATGATTCCACAGATTGGAGAGCTCTGATGAGGGCTGATGTTCTGAAGTATTTATGCAATGATTTTTTGAACGGGAAACCAAAAACATTTCATTATGGGTCGTCCTGGACGGAGTGTTTACGACTTATCCGAAATGTTAACCAACACTGGTATGATCGACCCCGTCCGAGGCCGCAACCCGAAGCATTCTATTTAGTGGGTGAACCCCAAGAGTACTTCCTTAACCTCTTCCCCAGTCTTCCTGTTGTGGTACACAGGATTGTCAGATCATGTGATTGGAAAGAACGACCGGAACTTAAGGAGTACTTCATCTACAGTATGTGCGACTCGTACCTATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF06479	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR010513	Domain	KEN domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR038357	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-