Gene detail

Detailed information of Chiridota_g9755 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g9755	AAA DOMAIN-CONTAINING	chr_5	10602461	10671056	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g9755

ATGGTGAAAACAAGACACGGGAGAGGAAACGAGGAAGAAGATGAGAACTTCTTGACTTTGAGGTCGAGAAATTCCAAAAGAAATTCACGGAGTGACTGTGAGGATATCATCAGCACTGTAAGTGAGTGCAATTTTTATACACCTGGTAAGAAGCGTCAGAGAATTCATTCCGTGGATAGTTCCTCCGGTACATCAAAAGACAGTCCAGTGTTCTCTGCAGGACGAGGGAGAAGAGGAGGTAAAACAAGTGCTGCGAGAAAGAGTTTAGACACCACCCCCACCCCGGTGATGTCCTCAAAGAGATCAGGGATACGCGGTAGCACAAGAAGCAATGGTATACGCAGTGATGGACAGCTCCGACGAAGCAGCAGGGAGAGAACCTCCACTTACAGTACAATGGATCAGAATTTACTTGCTGAATTGCAGCTCCAAGGTGCATCTCAGTTGGTGAGTGGCGTGAGGGTCACAAGGAGGTCATCCGTGAAGCTGGTCAAGATTGAAACTGAGCAGAAGAGGCTTatggaggagaatgatcgtgatcaggatgatgatcaggatgatgatcatgatcaggatgatgatcatgatcaggatgatgatgacgatgacggagaggagggagattcggatagtgacaaagaggacatggacgaagagTTGCAGGGCATGGACATGTATTCCAGGGTGAAGCAGAGGCACATCAAGGCCCGCAAAGCAAGGCAAGAGAATGAAGAGAAACTgaggaaggaggaggagaagaagcagcagaaggtagaagctgagggcaacgaggaaagggatgagagtgaggagTCAGATGATGACAGTGATGAAGATTCATCTgatgaagaggacagtgatgaggaggaggaggatggcgacggagaggatgaAAACACAGGACGTTCATACCAGCTCAGGAAACACAGGGTGCAGCCCAAACGATTTGAAGTGCCTGTCGATGATCGGAAAAGGAGAAGACGCAAAGCTGATATTCTTGAAGAACTTGGAATATCTGGGTCTCCAGTACGGAGACGTTATCACAGAAGAATGCACTTCACACCCGTCAGAAGTCCTAGGTTTAAAAGGCGTAAGCATCACGCGACCCACCATAGCTCCTCAACTAGCACAGATGAATCAGACGATGAGAGAAAGTTTGAGAGAAGAAAATCAAAGAGTATGGCTAAAGCAAGGAGACGGTGTTTACCAATGAACTTTGCCCCTGAAGATGCCGCGTCGGGCGTGATAAAGGATCGTCAACGCATTGGCTCTAGTTTGGCGGATGTGGATCCCATGAACATTGACAGGTCGGTGACCTTTGACAGTATCGGGGGCCTTGGCAAGCATCTTCAGGCGTTGAAGGAGATGGTGGTCTTTCCACTCTTGTATCCCGAGGTGTTTGAGAGGTTCAAGATAACTCCCCCAAGAGGAGTTTTATTTCATGGACCACCAGGAACAGGTAAAACACTTGTGGCAAGAGCGCTAGCAAATGAATGCCGCAATGGAGAGAAACGAGTGGCATTTTTCATGAGGAAAGGAGCAGACTGCTTGAGTAAATGGGTTGGTGAATCAGAGAGGCAGCTAAGACTACTTTTTGATCAGGCATACACCATGCGTCCGTCCATAATTTTCTTTGATGAGATTGATGGTTTGGCTCCTGTCCGGTCCAGCAGGCAAGATCAGATCCACAGCTCCATTGTGTCAACTCTGCTAGCTCTAATGGATGGCTTGGACAGCAGGGGAGAGATTGTTGTGATTGGTGCGACCAATCGGATTGATTCGATTGATCCTGCTTTGAGGAGACCAGGAAGATTTGATCGAGAGTTTCTTTTCTCCCTTCCATCCCAAGAGGCTCGACACAGCATTCTGACCATTCATACCAAAGAATGGAACCCCAAGCTGTCTGATGCTTTCCTATCCGAACTAGCAGAAAAATGTGTTGGTTACTGTGGTGCTGACGTGAAGGCACTATGCACAGAAGCAGCACTTTTTGCTCTACGACACCAGTACCCACAGATTTATTCTTCCAAAGAAAAACTGCAGTTAGATCCTTCTCAGATTCAGGTCACAGCGAGGGACTTCCATATGGCTATGCAAAGAATCGTCCCGGCAGCACAGAGGACAGTGGTGTCTCCGGGGAGGGCACTGTCCAGAGTGGTGAAGCCGCTCCTTCATCGTCAGATGGCGTACATCCTGGAAGCTTTGAAGAGGATATTTCCAGCAGCAAACCTGAAAAGCAGTACAAGTGCTAAGTATAATGATCTATCTACCTCAGATTCAACAGATGTGCTTGGTGAATTACTAAATGGTGATGACTTTGATGACAAAACTGGTCCATGTATATATGAAAATTTAAATGCTAGAAAGAAGAAACTTCGTATCAGTGGTGATGATGATTCTGAACAGACAAGATTCATGGATTTTGTCAGCTCATCCTTTTCAATTCCAAGCACCTTTCGACCTCGTCTTCTCATCACAGGCCACCAAGATCAGGGGCATAGCTCCCATCTCGCACCTGCAATATTACATCAATGTGAGAGTATGCCCGTTCATTGCCTGGATTTACCAACGTTATATGCTGTCAGTGCTAAGACTCCAGAAGAGTCGTGTGCACAGGTATTCAGAGAGGCTCGTCGCACTGCCCCTAGCGTCATCTTCATGCCTCACATATGCCAGTGGTGGCAGGCATGTACGTACACACTCCAAGCCACATTCCTTACTTTGCTTCAAGATCTACCTCCTTGCACACCTATTTTGCTACTGGCCACAGCTGATTGTTTACCGCAAGACATTCCAAGTGAGGTGAGAGAGCTGTTCATTTCCCAGAGAGAGGTGTACACCATGCGCAATCCGACCTCTGATGAGAGGAGAGAATTCTTCTCAGAGTTGGTGCTGATCAATGCAGCAAAACCTCCTCCAATGAGAAAAGAAACAGCTGCTAAAGTTCTTGAAGTGCTTCCAGTGGCTCTTCCCCCAGTACCACGACAACTGACCAATTCTGAGCTGGAGAAGCTCAGCATCAAAGAAGAGGCAACGTTAAGAGAGCTCAGAATATTCTTGAGAGATGTCCTTGAAAGGATTATAAGAGACAAAAAGTTCCGACCATTTCTTAATCCTGTGGATCCAAGCGAGGTGGAAGATTACTACGCTGTGATCAAGACGCCCATGGACCTTCTTACGATGGTGAACAAGGTGAACCTTCATAAGTACAACAGCGCCAAGGAGTTTCTGAAGGATATTGAACTCATCAGCCGCAATGCCTTGGAGTACAACCCTGATACCAATCCCTCAGACCGATTAATCAGGAGCAGAGCTTGTGAACTGAAGGATACAGCATATGCCATAATTGATGTAGAAATGGATTCAGACTTTGAACAACATTGTATTGACATCCATGAATCAAGATCAAAGCGTGGGGACACACCCACCAAAACCGCCCCCACCTTCTATCGAACATTGCCCCAGCTTGAACAAGAGGAAGCTCAGAGGGTAGCGAGTCAATCATCTTCCTCTGTGGTCAGACGATACCCCTTCTCTTTCCATGAACAATTAGGTGGTCAGGGGATGGGACGAACTCCGGCCACTCTTCCAAAGAAGAAGAAACGTAGACTGAGGAGCAGCTGGTCAAGAGGATTCATTAAGAAACCAAAGAAGAAACCTTTGAAAACCAAGGAAGATGAGGAGGAAGGTAACGAAGATGAAGAAAAGGATGAAGAATCAGGAAAAGAAAAGAATGCAGAAGATGAAATTAGAACCTCACAGGAATCAGAGGTGGACAAAGAAGAAGAGAAAGGCAACAGAGGGGATGATAACATTGATGAAAATAATACTGCAGAGGAAAACAGCAATGATTTTGTCATGACTGAAACTAATAATGACACTAGTAATGAAGGGTTCGATTCTCAGGGTAAAGATTCTAAAAGTGAGAAACCATTATTAAATGGTGTAGCTGATGAGGATAGTGAGGACAATGATGCATGTAGTATTCACAGTGAACCGTCCTTCCCAAGATTTGTATCGAAGGTCAGTCACAAGCACAGCACTGTTGAGACATCTCAGAATGTAGTTGAAAACAATGAAACGTGTATACCTTCCCATTCAGGTACTCCATCTGGAGGGAAGGAACCACAGTTTGTGAATGGAGACTGCGAGTATGAAGTGGTTGAGAATGGGGATCTCACCAATGAGGACAGTAATGATGTTGCTCAGGTGACTGAGCACACAGATTCTCAGGTACAAAATGGCCAGGTCAACAGTGAATGTCACACGGGTGAAGGCCAAGAAGATGTGTCGCCAAGAACACGAAGATTGACAAGGCGGATGGCAGCCGACATACACACACAGAGGGCGCTTGAAATCCTATCAGAGCCCATTCCACCGTTGGTTGTTGATAAAGAAAGATTACAGGTGCTGCTGAATACTATCGTAACTCAGACCACAAATTGGACCGTGACCCATTTGGAGAAGTTACATTGCAGCCTCAGTCAGTGTGTCTATAGGCACAAGATGGACTATGACAAGCTGAATCTAACAGAGGAGATGGAACAAGAAGTTGCTCAAGGGAAGATACCATCGCCCTCTTTGAACACTTAA

Transcript

Chiridota_g9755

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF00439	Bromodomain	Bromodomain	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487	Domain	Bromodomain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR018359	Conserved_site	Bromodomain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR045199	Family	ATPase family AAA domain-containing protein ATAD2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23069	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-