Detailed information of Chiridota_g9099 in Chiridota heheva Gene info
Gene IDAnnotationScaffoldStartEndStrand
Chiridota_g9099RETROTRANSPOSONchr_45561362555629898+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22955RETROTRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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