Gene detail

Detailed information of Chiridota_g8921 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g8921	WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATED	chr_4	49120876	49191787	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g8921

atgtctagctctggatgctttcgggacgttaaaccttgctatgctatgctaTGCCCTGTTCATATTATATCTGGTGATCAATCTGGCAAATATTCTAACCTGGAAGGCGTGCCTAAGGCTTTATTGCCAGGCGTAGGTGGGAAAAAGATTCTAGACTTCTGGTGGGATGCAATAAACATGCGACAGCTATTCAAGGAGGTTTATCTTGTGACAAATGCTGATAAATATAAGCACTATGAGCGTTGGGCCACAGCACATGACTTCCCAGTGGATAATATTATCAATGATGGGTCTACAATCCATGCTGCCAGGTTAGGTTCTGTGGGTGATTTTGACCTGGCTCTGAGGACCAAGCATGTGGATGATGATGTCTTGTTGGTCGCTGGGGATATGCTCTTCCAGGACTACAAATTTGACATCATGCAGGTTGTGCACTACTTCAAGAAACAGGGAGGTGAGCTCGCCATTTATTACGAAATGGATCCCACCGAGCAAACCAGAACAAGAGGCCTGGTAGAGGTATGCCCTACCACGAACAGAATAACAAAATTCTTCGAAAAACCTGAACCAGGTGAGACCAACTCTCGTCTAGCCAGCGTTGTCTTTTACTGCTTCCGAAAAGAGACCTTACCCACCATATCACAGTATCTATTATCGCATCCAGGAATTGATGACAGGAATTTTGGCAATTATTTGCAATGGTTGGTCAATGAATCAGATATACCAGTCTTTGGAATGAAACTACCCACAGGATTTCAACTCATCGGACAAGTGAATTTAGGAGATTATGAAAAATGGTTGAATTATTTCTCAGCTATGCGGTCAAAACCGTCTTCCAAGGAACCATTCACCTCCAAGGCATATGCAAGGATTGGCGTGATAGGTAACCCATCTGATGGTTTCTATGGGAAGACCATCTCCCTCTCCATCAAGAACTTCTGGGGTGAAGTCACCATCATTGAGAGCAAAGACCTGGTTCTTGTTCCTCACCCCCTCAACGATCCCACAGAGTTCGGTAGTCTGGGAGACCTCCATGGCATCAGTAGGAAGGAGGGGTATTTTGGTGGTCTCAGGCTTCTACAAGCCACATGCAAGAAATTTTACCAGTACTGCTCTGAGCAAGGAATTGCTCTACCAAAGAGAAATTTCAGCCTGAAATATGACACAAACATTCCAAGACAAGTTggtttAGCTGGTAGCAGTGCTATAGTCACAGCAACACTACGTTGCTTGATGCATTTCTTTGACCTCAATGGAAATGACTTACCAAAACCATTGCAACCTCAGTTTATTCTGGATGTGGAGGTGGATGAACTATTCATCAATGCAGGACTCCAGGATAGAGTCATCCAGATCTATGAAGGGCTTGTGTACATGGATTTTTCTCAAGAACTTATAAGGACGCAAGGGCATGGAAATTACATCAATATGGACCTCAGTTTGCTGCCAGTGCTGTGGCTTGCGTACATCCGGAACCCCAGTGACTCAGGAAAGATCCACAGCACAGTGAGAGAAAGATGGAGAACTGGTGATACTGATGTTGTGGAAGGCATGAAAGTATTCGCTTCAATAACAGATCAAGCAAAATCTGCCCTGGAAACAGGAGATATCGGTAGATTGACAGAGCTCATGGACTCAAATTTTGACCTGAGGAGAAAACTTTATGGCGATGATGTCATTGGTGCTGAAAATTTGCATATGATTGGTCTTGCTAGAAAGTTTGGGTCTTGTGCAAAATTTTCTGGGTCAGGTGGAGCTGTCATCGGTATCTGCCAAGATCCACAAAAAATGGCTGAATTAAGAGCTGCTTTCCAAACAGAGGGATATGTGATCTGTGATGTCATACCCAATGCGGCCAGgacacctgaggatgataggttgcaaaacctcaagttccagctctgtgttggtgttggcctaagtaataaaggacaacagggccaccgctaccttcttcaccaccatcctgaaccacatttggtcctcacacacttcttcccttatctggaggatcgctatcatcacacccttcccaaaccaggaaaggacagcaccaactcctccatctactgccccattgccctcacctgctgtctctgtaaaattatggaaaggatcattaagcagagactaaactggttccttgagacccaacagaatcttctctcctcaccaaagtag

Transcript

Chiridota_g8921

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan
PF00483	NTP_transferase	Nucleotidyl transferase	Family	Interproscan
PF08544	GHMP_kinases_C	GHMP kinases C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005835	Domain	Nucleotidyl transferase domain	Interproscan
IPR006204	Domain	GHMP kinase N-terminal domain	Interproscan
IPR013750	Domain	GHMP kinase, C-terminal domain	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR053034	Family	Glucuronokinase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38710	WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0047940	Molecular Function	glucuronokinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-