Gene detail

Detailed information of Chiridota_g397 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g397	F-BOX ONLY PROTEIN 7	chr_1	29601468	29617064	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g397

ATGGTAGTTATTCGCGTAAGGCTGGGTACCCGAACTGAGCGAATCGAGGTGAATCAGGATGACACTATTGCAATTTGTAAACACAAAATATCCGGAGTATTTGAAGTTCCTCCTGAAAAGTTTCAGCTCACCTTGAATGGCAAAGATTCGCTGGCAGAGAGAGAGGATACCATACTTTCGGATTTGGGTTTGGTGTCAGGTGATTTGATCAAACTTTTAGTTGATGAGAATGGTGTTAGGAAATGTGACTTGTCATTCCAAAGTAACAACAAAAAATGTAAAAATGAACAAGGGGTAGCAAACTGTAATGCAGCAGTTGGTAGCAGAGAGACAAATTATGCTGAGGGGTGTAAACTACAAAATGGAAGCTGCACAGTAAAATCAGATGCTGCAGTGACAGAAAGTAGATTACAATCATCTGTAATGGAAAATAGAGATTGTCCAAACACAATAACATCTATAAATGGCACAATACCTGTGCATGACACAACACCCACAAATGACCCTGTGTCTACAAGTGACACATCCAGGAATGTGTTGTCACATGAACCAATGCTGATTCGAGAATCGGATGGCAGGAAGGTCCCCTACGTGTTGCAGAGGCTGCTTGACATTGCAGAGCCAAGAGTCGCAGAAGAGTTGCTGGTTCTGGTTTTGCATGCTCTTATGATGGAGTCAGGATTTATTGTCAGCAAGAGAAAAGGAATCTCAGGTGACTCGGAAAATCAAGAAGATAAACCATCATCAAACGTGGCTGTATCAGATAAACAGAGAGCCGAAAATGATGAAATAGTGGAGACCCCTGGCGAGATTATGCTCCCAGCAGACTGGCGGTCAGTAGGGTGTTACAGGTTTGCTTACTACCAGAGATCATGCGATCCATCATATGAGTGTCACCTGACATGTGTCCCAGCTGGTTCAATTCTTGTTGTCCATGGAATGTTGAAGAACAATCCAGATGTGGTCTCATATAACTTTACTGTGAAAGAGTATGCAAGATGTGTTCAAGAAGGTCCATGCTTCACTGGATTGTCTCAACTCTCACGATTGTTCAAAGATAAAATTGCTCATCCACTAGTTCACAGCATCAGACAGTTATGTGGCCTGGCACCCATGTGTGGATTACTGGCATTAGCTACAGAAATTCAGTTGAAAATACTTAGCTATCTGAATGTGAAATCTGTGTTGCATGTGTCCGAGGTTTGTACATACTTCTACACACTGAGCAAAGATGATCTACTGTGGAGGCACCTGCTGGTCCGAGATTTTGGAGTGAAAGGTTCGGACACGAGATGGAAATCACTTTATAAAGAAAAATACGTGAATAAAAAGGCCATGACCGATTTCCGACATAGACCAGGGCAAGCTGATTTCTTCAATTTCCCTTCACATCTGCCACCAAGGAGACCACACATGTACCCTCCTGGCTACAGacctcagtttctcccctccaacttcacaacgatctttgaaacacctcaagcgaccttcctctccccttcagcaaccttcttctccccttctcaaccctcctcccctgctctccttgcaacttcccacctcccaccacccctcctcaccatagccaaagttcatcattgtctcccccccttccctggtgacacaggcttcaaaacactctcccctttcaccctcaccaaagccctgcaaggcctcataggtacccccgaccacataaaacgccttagatccgaaaaccttatcaaatgttctgcctccactcaatcaaaactcctcctagtttccactacccttgccaacaccggagtcaacatctacccctcccctcaccgctacttcaactcctccagggaagtcatcaaatgccctgatcttcagggcaccgccctgaggaattcaaaatcgaacttgagccgcagggcgtctttccctcacctgcaacaacaccacaatccaaaccagcacctattttctcactttcaacaccctctcctcactcttccatccacttcggctaccttaatgtccccatctccccctacatcccaactcccctcagatgccacaaatgccaaaggtatggccacagcaaaaacaactgccgctcttaaccctgctgtgcctcttgcggctccccgtctcatgataccaatacctgcaacaacaaacccagctgcataa

Transcript

Chiridota_g397

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF11566	PI31_Prot_N	PI31 proteasome regulator N-terminal	Family	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR021625	Domain	PI31 proteasome regulator, N-terminal	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR047118	Family	F-box only protein 7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15537	F-BOX ONLY PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:1903204	Biological Process	obsolete negative regulation of oxidative stress-induced neuron death	Interproscan
GO:1903599	Biological Process	positive regulation of autophagy of mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-