Detailed information of Chiridota_g3641 in Chiridota heheva Gene info
Gene IDAnnotationScaffoldStartEndStrand
Chiridota_g3641SPLICING FACTOR 3Bchr_26955805969649566+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF02037SAPSAP domainDomainInterproscan
PF04037DUF382Domain of unknown function (DUF382) FamilyInterproscan
PF04046PSPPSPFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR003034DomainSAP domainInterproscan
IPR006568DomainPSP, proline-richInterproscan
IPR007180DomainDomain of unknown function DUF382Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR052584FamilyPre-mRNA Spliceosomal U2 snRNP Complex ComponentInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12785SPLICING FACTOR 3BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005689Cellular ComponentU12-type spliceosomal complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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