Gene detail

Detailed information of Chiridota_g29785 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g29785	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	chr_17	27753997	27988911	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g29785

aTGGTTAAAATTCGGAAAATAGAGATTCCCGATCAGAAAGTTGAAAAAATAGTTGTAGAAATACGGAAAccagaagtcagattaaaaggtcatatttttgggaacttttgccacctctggcgctggagaaatggatacttcactattcacaagaggttcatggAATTTGGGGGTGGCGGAATCATCGATGCAGTGGTGCAGGAAAATTGTCAAAATTGGGAAGGCTTTCTTTCCGTTATCATGGCCGATGATGATCTGCTGTTTGACGATGTATATGAATTATGTGAGGTTATTGGAAAAGGGCCATTCAGTGAGGTACGAAGATGTATTCATCGTGAAACATCACAACACTTTGCAGTCAAAATAGTTGATGTCGCCAAATTCACTTCCAGTCCTGGGCTAAGCACAGAAGATCTGAAGCGGGAAGCCAGTATATGTCACAtgttgaagcacccccacattgttgagctactagaaacctacagttcagatggacttctctttatggtctttgaataCATGGAAGGAGCTGATCTGTGCTTTGAAATCGTCAAGAGGGCTAATTCAGGATTTGTTTATAGCGAAGCAGTGGCAAGTCATTATTTAAGACAGATTCTGGAAGCATTGCGGTACTGCCATGATAATGATATCATCCATCGGGATATAAAGCCTCATTGTGTCCTGTTGGCCACCAAAGAAAATTCAGCTCCTGTGAAACTGGGAGGTTTTGGTATTGCCATTCAACTGCCAGAGACCGGTCTTGTGGCTGGTGGTCGGATTGGGACCCCACACTTCATGGCGCCAGAGGTTGTGAAGAGAGAGCCGTATGGCAAGCCTGTGGATATCTGGGGATGTGGTGTAATGGTTTTTATTCTACTGAGCGGATCACTGCCATTTTTTGGAACCAAGGATCGATTGTTTGATATGATCTGTAAAGGCAGATACAATTTGAAGCCAAGACAGTGGGATACTATCTCAGATCATGCCAAGGACCTCGTCAGAAGGATGTTGAAAGTAGACCCCAATGAACGCATCACAGTAGAAGACGCCCTCTCTCATCCTTGGCTTCGTGAGAGAGACAGAGCTGCTCCTAAAATGCATCTGCATGAGACTGTGGAGGAGCTGAAGAAGTTCAACGCCAGGAGGAAACTAAAGGGAGCAGTATTAGCAGCTGTGGCCAGCCACAAATTCACAAATTTCTACAGTGATCCAAACACAAAGCACATCACAGATTTTGCAGAAGATGATCCCACCTCATCAGGAGCTGTAGCGCAAGTTCTGGATAGCCTGGAGGAGATCCAATGTCTGACTGACTGTGATGAGAGGGATCTGGATTTCTTACACAGTATCTTTGAGGACACTCAGCTTCATTCACTCCTGGATCTGTACGATAAAATCAACACCAAGTCGAGTGAGCAGATGCCCAACAAACTCAACATCCCCTCAGACAGTGTATTAAAGACAAGAGATGTCACTCAGATGTTGGAAAACCTTCGACAAACCAATCAGGATTCAACGGAAACATTGGAGCTTCAAAATATTATCGGTGAACCATATTTCAAGGCATTACTTCAAGCTCATGACGTGGTGGCCCATGAGGTGTACAGCACACACGCAATCCGGGTCACACCCCCTCCCACATCAGCGTTCCTGAACGGAGAGCAGTCCCCCAATGGTAACATGGAGAATGGTGACAAGGTGACCAGAGTAAGATTAGTTCAATTCCAGAAGAATTCAGATGAACCACTGGGTATTACATTGAAGATGAATGAAGAGCGACGATGCATCGTAGCTCGCATCATGCACGGTGGTATGATACACAGACAAGCCACGTTACACGTCGGCGATGAGATTCGTGAAATCAACGGTGTCTCGGTGGCCAATCAGACGGTAGAGAAACTCCAGAGAATGCTCAGTGAACTCCGAGGAAGCATTACTTTCAAAATTGTTCCAAGTTACAGGAGCGCGCCACAACCATGTGAGATCTACGTGAGAGCACAGTTTGACTATGATCCAGCTCAGGATGACCTGATCCCATGTCAGCAGGCCGGCCTTCACTTCAAGTGCGGCGACATTTTGCAGATTATTAGCAAAGACGACCACAACTGGTGGCAAGCAAGGAAAGAGGGCGACCCTCTCAACGGCACGGCAGGTCTCATTCCATCACCAGAGCTACAAGAATGGAGAGTGGCATGTCTTGCTATAGAAAGGGCGAAGAAAGAGCAACAGGCGTCATGCACCTGGTTTGGAAGAAAAAAGAAGCAATACAGAGATAAATACCTCGCCAAACATAATGCAGTCTTTGATCAGCTTGACTTAGTCACATATGAAGAAGTGGTTCGGCTTCCGGCATTTATGAGGAAAACATTGGTCTTACTAGGGGCACATGGTGTAGGCAGAAGACACATCAAAAACACACTCATTACATCTCATCCAAATAAATATGCATATCCAATTCCACATACGACAAGATCTTGTAAAAAAGACGAAGAAAACGGTAAAAATTATTACTTTGTAACCCACGAGGACATGATGGCAGACATTGCCAACAACCAGTACCTGGAGTATGGTACCCACGAGGATGCCATGTATGGTACCAAGCTGGAAACTATCAGGCAGATCCACAACAGGGGATTGATTGCCATCCTGGATGTAGAGCCCCAGGCCTTGAAAGTGCTTCGTTGCGCGGCCTTTGCTCCATTTGTTGTGTTCATTGCTGCCCCGTCCCTAGCAACGATGAATGATGTTCAAGACGTGAGCTTGGAAAGGTTAGCAAGAGAGTCAGAACTACTTGCACAAGCATACGGCCACTTCTTTGACCTGACCATCTACAACAACGACATCGATGAGACCATTCGCACCCTAGAACATGCCATGGAAGAGATTTGTACCACACCGCAGTGGGTTCCAGTCAGCTGG

Transcript

Chiridota_g29785

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00625	Guanylate_kin	Guanylate kinase	Domain	Interproscan
PF02828	L27	L27 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR004172	Domain	L27 domain	Interproscan
IPR008144	Domain	Guanylate kinase-like domain	Interproscan
IPR008145	Domain	Guanylate kinase/L-type calcium channel beta subunit	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR014775	Domain	L27 domain, C-terminal	Interproscan
IPR020590	Conserved_site	Guanylate kinase, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR036892	Homologous_superfamily	L27 domain superfamily	Interproscan
IPR050716	Family	Membrane-associated guanylate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23122	MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0034613	Biological Process	protein localization	Interproscan
GO:0046928	Biological Process	regulation of neurotransmitter secretion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-