| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g25277 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | chr_14 | 32170135 | 32224608 | - |
| CDS | |||||
| Chiridota_g25277 | |||||
| Transcript |
| Chiridota_g25277 |
| Protein |
| Chiridota_g25277 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Alpha-Helix|UBA |
| Ubiquitin Family | DUB|USP|USP |
| Ubiquitin Family | UBD|ZnF|ZnF_UBP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | Family | Interproscan |
| PF00627 | UBA | UBA/TS-N domain | Domain | Interproscan |
| PF02148 | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | Domain | Interproscan |
| PF17807 | zf-UBP_var | Variant UBP zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR001394 | Domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR001607 | Domain | Zinc finger, UBP-type | Interproscan |
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR018200 | Conserved_site | Ubiquitin specific protease, conserved site | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR041432 | Domain | Ubiquitinyl hydrolase, variant UBP zinc finger | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR050185 | Family | Ubiquitin carboxyl-terminal hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21646 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016579 | Biological Process | protein deubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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