| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g2081 | TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE | chr_2 | 14984987 | 15021411 | + |
| CDS | |||||
| Chiridota_g2081 | |||||
| Transcript |
| Chiridota_g2081 |
| Protein |
| Chiridota_g2081 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00075 | RNase_H | RNase H | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF08704 | GCD14 | tRNA methyltransferase complex GCD14 subunit | Family | Interproscan |
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR002156 | Domain | Ribonuclease H domain | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR014816 | Family | tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR049470 | Domain | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12133 | TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004523 | Molecular Function | RNA-DNA hybrid ribonuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0031515 | Cellular Component | tRNA (m1A) methyltransferase complex | Interproscan |
| GO:0160107 | Molecular Function | tRNA (adenine(58)-N1)-methyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
