Gene detail

Detailed information of Chiridota_g17405 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g17405	PROTEIN CBG16200	chr_9	28381077	28419225	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g17405

ATGAtatatgatccattAACTGTTTATCTCAGTCGGCGGCACAGTGATAAAAAGCTGGTTATCATCAAGCAGATCCCTGTGGAGCAAATGACGAAGGAAGAACGACAGGCAGCTCTGAATGAGGTCAAAGTCTTGTCTATGTTGCACCATCCTAACATTATCGAGTACTTTGAAAATTTCCTGGAAGACAAAGCCTTGATGATTGTCATGGAATATGCGCAAGGTGGCACCTTGTTTGAGTATCTTCAAGAGAAAGGAAATGCCCTCTTAGAGGAAGATGAAGCTCTTCGCCTATTCACCCAGATATTGTTGTCTCTGCAACATGTGCACGCCAAGCAGATTCTCCACCGAGATTTAAAAACGCAGAATATTCTCATGAATAAGTCACGAGAAGTTGTCAAGACCGGAGATTTTGGAATATCAAAGATTCTGAGCAGCAAAAGCAAGGCGGTCACCGTGGTTGGAACTCCTTGTTACATATCTCCAGAATTGTGTGAAGGAAAACCCTACAACCAAAAGAGTGACATCTGGGCAGTTGGATGTGTGCTGTACGAGCTACTGACTCTCAAACGAGCTTTTGAAGCAAATACTTTACCAGCATTGGTCATGAAGATTATGCGAGGGTCAGTTGCTCCTATATCCGATCGCTACAGCGACAGCATCAAGAAGCTTCTACTAAGCATGCTCCAACAAGATCCAGATAAAAGACCAACCACAAACCAGGTCATGGCGGAGCCAATCATAAGGAGGATACTTGCCAAAGTCACCTTTGATATGGGAAGGGTCAAAGGTCATTCAAGATACATTCGGCCAGCCTCCACACATCCCGCAACTGTTCTTTCTCAGAGAAGTGGCAGTCGAGCAAGTCGAGCAAGTACAACCAAGATGTCTTCACGTAAAGGCTCATTAGCAAGTGTATTCTTGGATTCAAGTAATAACAGTAGCATTATGAGGCCACATCCAGTTTCACTCATCTACTACTGGGGCATGGGATCTACACTTCCAGTATGCTTACCATTGCCCAATAGTGACATCCAAATTACGACTGTAGCAGTGGGTAGGATGCAGAAAGTAGGCTTGGCACAATCAGGGAGGCTCATTGTTTGGGAGTCTTCGTCTGTCACCAGTGAGTCCATTTTACCGGGTTCGTTAGATAATCAGCTGGAAACGTTTGTGCCTCGTTTTCTGGAGGGCCAATCAGCAGTCACTATTCGACATGTAGCTTGTGGTGATTTGTTTACGGCTTGTTTGACAGATCGTGGTATCCTCATGACGTTTGGTAGTGGTGCCCATGGCTGTCTAGGGCACGGTAATTACCATGATGTACTGCAGGCCAAGATTGTGGAAGCGTTGTTGGGCTATGAGGTGGCGCAGGTATCATGTGGTGCGTCACATGTCATGGTAGTGGCCAATGAAAATGAAGTATTTGCTTGGGGACGTGGGGACAATGGTCGTCTTGGACTAGGAAACTATGAATCACATGCCACCCCTCAGATGGTGCCCCTACCCCCTCACTTTGTTGCCTCGGCGGTAGAATGTGGTCAAGACAGTAGTGTGCTTTTGACGACTAGCAAAAGGCTTCTGGCATGTGGCAACAATAGGTATAACAAGCTGGGATTAGATAAGTTGAACCCGACTGATGGCATCAGTCAACAGGTTTCTGAGTCTGCAACCTTTTCTGTTGTTGCTACATCTCCTCTTTCTTTGGCATCAGTCACAGCAGTTGCTCTAGGAACATCTCATTCAGCTTATCTCACAGTGTCTGGAGATTGTTGGCTGTTGGGATCTAATCAGTTTGGACAGCTGGGATGCAAGACCCCATCAGCTGCCTCAAGGACTCCCGTTCACCCCACTATAACAGATGCAGTGAAGTTCACGCACATTGCTTGTGGGGACACATTCACTGTTGCCATCCAAAATGgtgtagcggatggtgaccgagctggcaacgcacacgagcaggtaatctcgagtaattacagaagtgattatcaattAACATTCTCCATTTACAATTTTCTTTCGGCATTTCTTAAAACAGATGGAGAAGTCTTCTCTTGGGGTAAAGGAAGCAGAGGCCGCTTGGGGAGACAGGACTCGAAGTCATCCCTTCCAGGTCCAGTCGTCTTGAAAAATGAGGTGCCTTTTGTCATAGCGGATTTGTCTTGTAATCATGGAAACACACTTTTGGCAACATTGCGTAAGTTTGATTCATAA

Transcript

Chiridota_g17405

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR044120	Domain	Nek8, catalytic domain	Interproscan
IPR051997	Family	Serine/threonine-protein kinase NEK	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44535	PROTEIN CBG16200	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-