| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g17288 | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED | chr_9 | 24684712 | 24735532 | + |
| CDS | |||||
| Chiridota_g17288 | |||||
| Transcript |
| Chiridota_g17288 |
| Protein |
| Chiridota_g17288 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UBL|NEDD8 |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_PIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF02182 | SAD_SRA | SAD/SRA domain | Domain | Interproscan |
| PF12148 | TTD | Tandem tudor domain within UHRF1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000626 | Domain | Ubiquitin-like domain | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR003105 | Domain | SRA-YDG | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015947 | Homologous_superfamily | PUA-like superfamily | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR021991 | Domain | UHRF1, tandem tudor domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR036987 | Homologous_superfamily | SRA-YDG superfamily | Interproscan |
| IPR045134 | Family | UHRF1/2-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14140 | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0010216 | Biological Process | obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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