| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g16939 | PHOSPHOHEXOMUTASE FAMILY MEMBER | chr_9 | 13146203 | 13187247 | + |
| CDS | |||||
| Chiridota_g16939 | |||||
| Transcript |
| Chiridota_g16939 |
| Protein |
| Chiridota_g16939 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF02878 | PGM_PMM_I | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I | Domain | Interproscan |
| PF02879 | PGM_PMM_II | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II | Domain | Interproscan |
| PF02880 | PGM_PMM_III | Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III | Domain | Interproscan |
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR002156 | Domain | Ribonuclease H domain | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR005841 | Family | Alpha-D-phosphohexomutase superfamily | Interproscan |
| IPR005844 | Domain | Alpha-D-phosphohexomutase, alpha/beta/alpha domain I | Interproscan |
| IPR005845 | Domain | Alpha-D-phosphohexomutase, alpha/beta/alpha domain II | Interproscan |
| IPR005846 | Domain | Alpha-D-phosphohexomutase, alpha/beta/alpha domain III | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR016055 | Homologous_superfamily | Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III | Interproscan |
| IPR016066 | Conserved_site | Alpha-D-phosphohexomutase, conserved site | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR036900 | Homologous_superfamily | Alpha-D-phosphohexomutase, C-terminal domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR045244 | Family | Phosphoglucomutase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22573 | PHOSPHOHEXOMUTASE FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000287 | Molecular Function | magnesium ion binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004523 | Molecular Function | RNA-DNA hybrid ribonuclease activity | Interproscan |
| GO:0004614 | Molecular Function | phosphoglucomutase activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0005975 | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0016868 | Molecular Function | intramolecular phosphotransferase activity | Interproscan |
| GO:0071704 | Biological Process | obsolete organic substance metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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