| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g16365 | SYNAPTOBREVIN HOMOLOG YKT6 | chr_8 | 47152512 | 47173969 | - |
| CDS | |||||
| Chiridota_g16365 | |||||
| Transcript |
| Chiridota_g16365 |
| Protein |
| Chiridota_g16365 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00075 | RNase_H | RNase H | Domain | Interproscan |
| PF00957 | Synaptobrevin | Synaptobrevin | Family | Interproscan |
| PF13774 | Longin | Regulated-SNARE-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001388 | Family | Synaptobrevin-like | Interproscan |
| IPR002156 | Domain | Ribonuclease H domain | Interproscan |
| IPR010908 | Domain | Longin domain | Interproscan |
| IPR011012 | Homologous_superfamily | Longin-like domain superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR042855 | Domain | v-SNARE, coiled-coil homology domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45806 | SYNAPTOBREVIN HOMOLOG YKT6 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004523 | Molecular Function | RNA-DNA hybrid ribonuclease activity | Interproscan |
| GO:0005484 | Molecular Function | SNAP receptor activity | Interproscan |
| GO:0005794 | Cellular Component | Golgi apparatus | Interproscan |
| GO:0006888 | Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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