Gene detail

Detailed information of Chiridota_g13826 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g13826	SULFOTRANSFERASE SULT	chr_7	20423374	20430547	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g13826

ATGGCTGAGGATAAAGAGGTCTGGAATTTTACGTTTCAGAGTTTTCTAAGTGGTGAATattacaacgataatggtgataatgattatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgacgaagttgctgctgttgctgccgccgctgctgctgctgctgctgctgctgttgctgctgctgctgctgctgctgctgctgatgatgatgatgatgatgatgatgatgatgatgatgatgatgataatgatgatgataaagatgaagatgatgatgatgatgatgatgacgaagctgctgctgttgctgccgccgccgccgccgccgctgctgctgctgctgctgatgatgataatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgttgttgctgctggtaatgatgctgctgctgctgatgatgatgatgatgatgacgacgatgatgattatgataatgaACGTCTGCGTACAGTCTTTTTTATTCTTGTAATATCGGATCTATCCAAATTCCTGGAGCATCCTCTTGACCAAGATGCAGTTGCAAGAGTTATGGAGCATGCAAGCATCAAAGGAATGAAAAAGAGCTACGACGAGATTGAGAAAATAAGAGAAGATGGAAATATGTTAACAAAAGCAAACGGCCAATTGCCCTTTATTCAGAAAGGAGTCATAGGATCGTGGAAACACAGACTTACTGTTGCTGAAAATGAAGAGTTCGACAGGTTATACCAAGAAAAGATGGCGCActtacgcattaaatcagacctctttcaacttggcatcaaccccgccactctcggcacctattcctggcccacttttccgccttgggccacccctcttccttctgtccacctagacctctccacttataacaaatctcaaactcaccctaatctcttcatcaatctccacaaccaaatcaaagaccaactctcaaattacacctccatctatactgatggctccaaggaaggcaacaagacagctgctgctgccatcatccaagacatcaccctcagtagcagacttcctgaccactcatccatcttttcagccgaggctaaggccattctcctcgccctcaactttattgagtactctcctcttagtcactttgccattttctctgactcaaaggctgttcttacttcattactcaatcttaaatgggataacctcacctgccacctcctcctccggaaactcttttctcccaccctctgcaggaaaagtgttcttttcttctggatacccagccatgtcggcatccctggcaatgacagggctgatacagccgctaagcttgcccttaacctcctcccttccccttttcccaaaaccctctctgacatcaaaccgcttatcgcttctcttgttcgtgaccgctggcaaaccttatggaacttccaaattgataacaaactccatgttatccagcccacaatcccgatcaaatccaccattaacaacctttctcgtatcgacaacgttcatattacccgtcttagaattgGTCATTTCTGTCTCCTTCGAGGAAGCTCAGACAAGCTTGTGGGTGTAACCGACAATAGAGCGAGAACATTTTGTGTTCATTGCCATAAGCAAAAGACTTTAAAGGAAAATTTCTTCACAGCATTTAGGCTTACAATCTTGGACAATACTGTtgaactttgcacttcaagtaaaagaaaaacgcttttttttaatatagaaaaagataagaatggtcttgggatctgcctttatgcagttatgacatcacaacgtgttttgaactgtccaagtgaactggcatggcgaatgtgtgaaggcaaagagttccaaacatggggtgctgcagctgaaaaagccctagaaccagctttggtgttagttctgggttcagtcaggaagttttcagaagaggagcgaagggatcgtgctggtgtataa

Transcript

Chiridota_g13826

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00685	Sulfotransfer_1	Sulfotransferase domain	Domain	Interproscan
PF13456	RVT_3	Reverse transcriptase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000863	Domain	Sulfotransferase domain	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11783	SULFOTRANSFERASE SULT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0051923	Biological Process	sulfation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-