Gene detail

Detailed information of Chiridota_g12451 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g12451	SRCR DOMAIN-CONTAINING PROTEIN	chr_6	32531188	32557506	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g12451

atgggagcagcactgcttttggttactgtgcaactaaccgccacccccttccccgcctttcccaagtttcccaagccaaaaaactctggtattttgtccgtgagattggctggtggcgctaacattaacgaggggctagtcgaagtttatatcgatggaatatggggaaatttctgtagcaacgattggaataaacaaaaggcaaattacgtgtgcagagagttggggtataacggagcgctggaagttgtagaaaacactgaacgattcggaagtagcaaaggccctgtgctgttgggtggactgaACTGTTTTGGTACTATTCGACCATCGATGCTAAAGTATTGCCAAGCTCATATCTCTACCATTCAGGATTGTACTAACACGCAGGATCTGGGTGTGATATGTGGCTTGGGTATAGCTAATATAAGACTCGATGGTAGTTCTTCAAGTCATGAAGGCCAAATTGAAGTTGAAGTCAGTTCTGATCGAGAATGGATACCAGTATGCTACAATACCTGGGCTATAACGAATGCGAGGGTTGTCTGTCGTGAGGTTGGATATAGTGATGTAATGGAAACTACTCAAAAATCCCACATTGGCAAAGGTTCTGGAAAAGTAATGAATGTTCTATGTAGTGGAGAAGAGTCGTCTCTCAATCAATGCGCGGGTTATATAACGAATGGAGGCATGTGTGAGGACGAACTCTATGCTGTGTGTGGCAACGGTAAGGTTATAAAATACAGcaacgattgggatgatatacaaaattctccaaattacgtgtgcaaagagttggggtacaacagagctctggaagttgtacgaaatattgcacggtttgAAAGAAGCCGAAGTCCAGTGCTGTTGGGTGGCCTGAACTGTTCTGGCATTGTTCAACCTTTGATGCTAGAATACTGCCGAGCTCATATCTCTACCTTTCAATATTGTACTAACACGCAGTATCCGGGTGTCATATGTGGCTTGGGTATAGCTAATATAAgactcgttggtagtacttcaagtaatgaaggtcaaattgaggtcagtttcgagggagaatggataccagtttgctacaatacctgggccataacggatgcgagggttgtctgtcgtgagctcggatatagtgatgtaatgaaaacTACTAGAGACCCCCACATTCGTGAAGGTTCTGGAAAAGTAATGAATGTTGTATGTAGTGGAGAAGAGTCGTCTTTCAATCAATGCGCGGGTTATATAACGAATAGAAGCATGTGTGAGGACGGACTCCACGCTGTGTGTGGCAATGGTGTGCATAACATTAGACTCGAAGGGAGCAATGTAACGAATGCGGGTCGGGTAGCAGTACACTTTAAAAGAACTTGGGGAACCATCTGCAATAACGAGTGGGACATACTCGATGCAAATGTCGTTTGCAGACAGCTCGGGTTCATAAAAGCATTAGAAGTTGTTACTGATTCCCGTTTTGGCTATGGTAGCAGCTTGTTTTGGTTAGACGAGATGAGATGTCATGGTAATGAATCGTCTGTTACGGATTGTCGTAGCAAACCAACCGGCTTACATGATTGTGAACGTGGAAAAGAGTCTGGAGTTGTTTGTGGAAATGACGTGACTTTCGTGCAACTAACAAATAGTAGCGAGCGGCATCATggtcgtgttgaagtgcttgttgaaggcaggtggggaactatttgcgatgatggatgggatataacagacgcccatgtactttgcagatctcttggtttcaagcgagcaatagaggcaatctcgggtggggtctatgctgaaggtgatggtgaaattacgcttagtgatgttaattgcattggagacgaggaatggattcgattttgcaagtcagatggtgtacataattgtacacaccaacaggatgctggtgtTATCTGTGAACCTGAACTCCTTTCTGATTTGGTAAATGCAGCAGAGCAAGCAAAGAAAATACTAAAAGGCAGCATGGCCTCGAATTCTTCCAGTTGCAAGAATAACGTGCACGTGTCTACTAATGCAATTGAAATAATGCTTTACAATGGAGCGGACTTAAACAATGGATCTCTAACACCTTCACTGGATATAACAATCGACCCTTTTGTCAACGAttgtgATGTCAGTATCATCCTCACAGAAAGCAAAACAAATGATGAAGAATTTAGAAAAGAATACATCTTGAAAATCAAAGAAGTTGCAGAGTTCGAGAATATTCCAAACTTGCTGGCAAGCAATTTGTCTTCGTTGACAGTGACCTTAAATGATTCTGAAAAAATACCAGACAACATAACGTATACAATGAGGCGCGTGGAGCCCAGCGATACTGGAAAACGTGTTGCTGAATTTCACTGTGGGTCTCTCCGCCGAGATGATTCAGTATCAAGTGATCAGAATTTGAAGTGGAACACTGACGACTGCCAGATGCTTTCAGGTGACGGTGATCAAATTACTTGCTTTTGCAAATCTGTGACAAACTTTGCCATCCTGATGAGCCTGAAGCCTCTGGAGGCTGATCCCATCTTGAGTGTGATATCAATAATCGGCTTAAGTATTTCAATCACATCCTTAATAGTGGCGATTTCAACATACATATGTGTATGGTCCACCATTGGCAGCATACGGTTTGAAGTTCACACCAATTTAATGGTTGCTTTACTGGCCTCGTCGCTACTTTACGTTTTCGGAATAGAAACCAGAGGAGATACATGCAAAGTAATCACCATTCTTTTACACTTCCTGTATCTTGCCGTTTTTACGTGGATGCTGGTAGAAGGCGTACATCTTTATCGTCAAGTCGTTGTGGTTTTTGATGGAACAAGGAATTTTCGTTTCTCGTATCACCTAATTGGTTGGGGAATTCCATTTCTTGTAGCGTCAGCCGTTGGAGTAACTCATATTAAGTATTACGGAACTGGAATAGGTAATGAACAAAAAGGATTCTTTGTATCACTGCTGTGCTGTTTTCTGAATAAAGAGGTTCGCAGTGCAATCAGTAACAAGATAAGGCGCGGAAAAATTGGAACAATGGTAGATTCTACTTCTGGCACAAAAGTAACGCATGGTGTCACATCTGCACAAACTGCCATCAGTACAACTGAGATCACCCCCAACCATAACAAGGGTGTATCGAAGAGTTTAAACATCAGCATAGTAAATCCCAAAAAAATTGAGGTCGTAGACTCGGAAACACATGGCTTACGAAGAACACAGGTTGCTGTAATTGCAGACCAAATTCATGTGGATGATGTAAATGACGAATATTAA

Transcript

Chiridota_g12451

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00530	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR001190	Domain	SRCR domain	Interproscan
IPR017448	Domain	SRCR-like domain	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR036772	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR050686	Family	SRCR-S1 Scavenger Receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48071	SRCR DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-