Gene detail

Detailed information of Chiridota_g10537 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g10537	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	chr_5	37746143	37800969	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g10537

atgatagtggaggacttatggcagtatggtcatccacagaagatgtctcataaggaaactgccagggatgtttgtaaagttgattgtcacttgttaaagttaaatttctacagGATGCAGCTATCAAGTGCAATGAATGAATTGGATTTGGTGACCCTGAGATCAACGCTTTCAGACATAATTAATGAAATGAGCTACGGGGCTGATTTTGCAGACATTTTTCCAGACATGGTGAAGGTTTGTGGCACAGTAGATTTGGTCTGCAAGAAGCTTGTCTACCTATATATGAGTCATTATGCCAACCAAGAACCCAGCCTAACCTTACTTACAATCAACAGCCTACATAAAGATTGTATCGATCCTAATCCAATGCTGAGGGGGCTTGCTTTGAAAACTTTATGCAATATCAGACTTGAAGAATTCCTGCCGTACATCAAGCCTCCTCTTCTTGCTGCCTTTGATGACAAAAGCTCTTATGTCAGACAAGTTGCTCTCACCTCCTGCTTGAAGGTTCACAGTTTTAATCCAGAATTTTCGAAAGCCAATAGATTAGTTGACAAGATTTATGAGCTGCTACTAGGGGATCAGGATGGTATCGTAGTGACACATGCCTTGTGCACCTTGCAAGAAATACTACAAGCACAGGGAGGCCTGACTATCAGTCGGAAAATTGCAGTGCATCTGTTGAACAGGTTGGTAAGTTTCACAGACTGGGGAAAAGCATATGTGCTACAGGTTCTGCTGCAGTACCAGCCTGCTACTGAAGAGGAAATCTTTGATATAATGAATCTCTTAGATGCCCATTTGAATTACCCAAATTCTGGTGTCACTTTAGCAGTTTTCAAACTCATGCTCCATCTGACCAATGGGATGCCTGGCGTGCAGAAAGATGTTCTTAGAAAGCTGAATGGTGTGTTACTGAATCTCCTTGGCCATGAGCAGCCAGAACTGGTGTATGTGTCGTTGTGTCATTTGCAGTGGTTACATCAGTATTCATCCAAAAAGCTCACAAAGGAATACAAGAAGTTTTTCTGCAGATATTCAGAACCACTGTATGTAAAATGTAAAAGAGTGGAGATTCTTAAGGAGCTATGCACCCCATCCAATCACAAGGAGATTATTGAGGAGCTGAATACCTACTGTTTAGATGTTTCCTCCGAGCTTGCTCAGAGGGCTGTAGAAGCCATGAGCTTTATTGCCAAGAAGTCAAAGGTCATGGGAGAACTTTGTTTCGAGATGCTCATCAAGCTAGTTCCAATTGAAAGGGTGTCATCGTTATCACTAGCTTGCATGAAAGATTTAATGGACATTGATTGGTACGAGAAGTTCATCCCTGAGGTTTTAGATGTAGTGCCAAGTCTGTGGAGCAGCGTGGATGATGCAAGGGGCAAGGAGGCTCTGCTGTGGATCATTGGCCAGCATGGGAAGGACTTATCTGAAGCGCCATACTTACTGGAGGCTATGATCGACAGAGTGGATGAGGAGAGGAATTCACTGCTGAAATGCCACTTACTGACAGCCACTACCAAGCTCTTCTTCACGAGACCAGCAGAATGCCAGGATATGCTGGGTAAATTACTGGAGCATTGTGTGGAAGGCCAGGAGAATTCAGACCTCAGAGACAAGGGAGTTCTTTATTACCAGCTTCTTCAGGATGATATATCACAGGCAAAGCAGATTTTGTTTCCTTCTGATAGGCAGTCATTACTATGTCCATCACATTCTCCAAAGACACACACACCTTCTGTGGGTGACTTTAACACACTTGGCTTGTTGCTAGTTTCTGAAAAATGGGAACAACTTCAACATAATACCAACTTCAAAGGTTCCTATTCAAAGAAGGTTCCACCTCAAGTAAACGCAGTCAACAATGATCCTCCACTACCTCAGCAACCAGAAGAAGGTCAGCTAGTTGACCTTACTGGGTCACATGATAATGACCAAGATGTAGATCAAAATGTAACCGAAAAAGAAGAGAAGAAACTTTGTATGCTGCCAGAGGAAAGTAAGATAGAACATGATGTTTCAGAAGAAGAAAAGGTTGCGGACCAAGAGTTTTTTATGAAGGAAGCTTCAAGGGTGGAGATGCACAAGGATTTTCAAATGACGTCTGCTCAGTTTGAAGAATTATGGACAAAATTGCCTTCACATAATCCACTGGAAATTGAGAAAGAAGTTTCCAATCCTTCAAGCTTTGTGTCTAAATGGGAAGACGTTGGATTTCATACCATGGCAACCACACCTGAAGAGAGCCAGGAGTGGAGGGCATTTGTTTATGCAATGCATGAAACTTCTGTATTCCTGATCGAGATAAATGTAAACCAATCAGATAAAAGAATGACAATTCAAACAAGATGTGATGGCGTTGAGTCGGAGAGGAAACGAGCAGAACATTTCTTGCAACAGCTCATACATGAAGAGAGTTAA

Transcript

Chiridota_g10537

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01602	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan
PF09066	B2-adapt-app_C	Beta2-adaptin appendage, C-terminal sub-domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002553	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR012295	Homologous_superfamily	TBP domain superfamily	Interproscan
IPR015151	Domain	Beta-adaptin appendage, C-terminal subdomain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR016342	Family	AP-1/2/4 complex subunit beta	Interproscan
IPR026739	Family	AP complex subunit beta	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11134	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117	Cellular Component	membrane coat	Interproscan
GO:0030131	Cellular Component	clathrin adaptor complex	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-