Gene detail

Detailed information of Chiridota_g1024 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g1024	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	chr_1	61153582	61170036	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g1024

atgaccacccatctaactggtgctgggcttgtggatcaattactagttaagttactcagggccacgaccaaccatctaactggtgctgggcttgtggatcaattactagttaagttactcagggccacgaccaaccatctaactggtgctgggcttgtggatcaattactagtaaagttactcagggccaagaccacccatctgactggtgctgggcttgtggatcaattactagttaagttactcagggccatgaccacccatctaactggtgctgggcttgtggatcaattactagttaagttactcagggccatgaccacccatctaactgggcttgtggatcaattactagttaagttactcagggccatgaccacccatctgactggtgctgggcttgtggatcaattactagttacgttactcagggccacgaccacccatctgactggtgctgggttggccaattctgaagaaatcgaccttctggcctccaccttcaacccggtcgtcttctgcctacaagaaactttcttgaaaaccaccgaccattactcccttaacaactttgcttgctatcacaaacatcaagtggatgctgacagggcctgtggtggcgtctccattctcgttagacacgatatcccacacagccctgttcgtgtgcacaccgaccttcaggccatctgtatttctatctccctccacaaaactttcactctctgcaatatctatctccctcccaacaccaacattcaaccaaccagccttaacaacctcatctctcagcttcccacccccttcatccttcttggtgacttcaacgctcacaaccctctgtggggctctaataccaccacccctagaggcaagttcatcgaaaacgctctccgtcagcacagcctgtccttactgaacactaactccccgacctaccttcatcctgccacaggctctttcacctgtattgacctgtctatctgttcccctaacctcctccctgattttagttggagagtcactgctgacctctgtggtagtgatcattaccctcttcttatacactccaatcttcaaatccccactgagcacacccccaattggaacctcgacaaggctgactggtccctttttgaaaccctctgtgactcacacctctccccccatcttctcgaggatgaggatcccatgtctaacttcagtaatatccttatcaacatcgccacctgctcaattcccaaaacctccaaacccccaaatcatccccccaacccctggttctcggatgactgcaaaaccgccatcaagaacaggaaaagagccctcaggaactttaaaactaacccgaccacccataaccttaaccactttcgcatcagccgtgccaaggccagacgcactatcaaggacagtaaaaccaacacttggaacaactttatctcttctctcaccaccaacacccccactaagaagatttggagaatggttaacagcttccacagcagagtaggcaaatcttccatctcccatctctcttggaatggagaccttctcaccgcaaaaaaggacatcgttgaccacctcgccgcctctttcagcaacatctcgtcctcgaccaactactccaatgctttcaaaatcaaaaaagcttgcgatgaagcccggagaatcacttttccctctgacaactccgaaagctacaacacccctctcaccctttctgaattaaaccaagccatcaacgacgctggctgcacctccaagggcccagataacatcccctatcagtttctaaaacacctccccatcaaggccaccactaccctactcaccatcttcaaccacatttggtcctcacactcctttccccctatctggaggacagctattgtcatccccaatcctctctcctcaccaaagcggcttccgaaaacgtcgcaataccctagaccagttaattacgctcgacccgctatccgggaatcctttgcaaaaaaggaacacctcattgccatattttttgacctcgagaaagctttcgacactacttggaaatacggcattacccgaaaacttcacaccattggcctcagaggccacctccccatctttattcaaaacttcctctcacccaggcagttccaagttcgtattggccacaccctctccaagccgtacccccaagaagagggcgtcccccaaggcagcatcctctcccctactctcttcaacctgagcattaatgacatcgggaatgaccttggccccagcatcaaacgtaccctctacgtagatgacttcaccatcttctactcctcccttagctttcctattgttgaaaataggctccaaaccagcctcaatcagctgcaagtctggagcaacaataacggttttagattctccaaagacaagacagtctgcatgcacttttgtcatttcaacaacctccaccccaacccgaactttgtgctcaatgggaatcgcatccctaaagttgaaaacacaaagttccttggtctaactctagaccccaagctcacctacaagccacacatcaccaacctgaaactaaaatgcaatagctccctcaacctcctccgactgctctccaacactacttggggagcgaaccactatgctctcctcaaaattttcaggctcaccattcgtgccaagcttgactatggcaatattgtttactgtgtcgctcacaactcatacctcaaccacattaacaccatccaaaatgaagccctcaggctttgtctaggagcctacaggacctccccaatcactagccttcatgttgaagccaacgaacccccctttctacttagatgtaaaaagcttagcctctcctatgcttttagagtcctcaccaacacccagaaccctgtttacaacctcattaggtaccccaatttctcctccctctttgataggactaaaaccctatcgcctcccttcagcttacgcattaaatcagacctctttcaacttggcatcaaccccgccactctcggcacctattcctggcccacttttctgccttgggccaccccccttccttctgtccacctagacctctccacttataacaaaactcaaactcaccctaatctcttcatcaatctccacaaccaaatcaaagaccaactctcaaattacacctccatctatactgatggctccaaggaaggcaacaagacagctgctgctgccatcgtccaagacatcaccctcagtagcagacttcctgaccactcatccatcttttcagccgaggctaaggccattctcctcgccctcaactttattgagtactctcctcttagtcactttgccattttctctgactcaaaggctgttcttacttcattactcaatcttaaatgggataacctcacctgccacctcctcctccggaaactcttctctcccaccctctgcaggaaaagtgttcttttcttctggatacccagccatgttggcatccctggcaatgacagggctgatacagccgctaagcttgcccttaacctcctcccttccccttttcccaaaaccctctctgacatcaaaccgcttatcgcttctcttgttcgtgaccgctggcaaaccttatggaaattccaaattgataacaaactccatgttatccagcccacaatcccgatcaaatccaccatcaacaacctttctcgtatcgacaacgttcatattacccgtcttagaattggtcacacccacctcactcactcccacctccttattggttcccccaacccctctgtaacaattgccactgcatcctcacaatccaacacGTGGTACAGAGCACCAGAGCTGCTGTATGGTGCAAGGAAGTACGATGAAGGAGTAGATCTATGGGCTGTGGGATGTATCTTTGGTGAACTTCTGAACAACTCACCTCTTTTTCCTGGAGAGTATGATATAGAACAGCTTTGTTGTGTCAGAAGGGTTCTTGGTACGCCTACAGAAAAGACATGGCCAGGAATGAAGGACCTTCCTGATTACAACAAGATTACATTTCCTGAGAACCCACCAATCCCGTTGGAGGAGATAGTGCCCGACGCATTACCAGAGGCTGTGGATTTGTTGAAGAGGTTCCTTGTTTATCCATCCAAACAGAGAATATCTGCTAAAGAGGCTCTTCTGCACAGATACTTCTTCACAGAACCGTTACCAGCCCACCACTCAGAATTGCCGATACCCGAAAGGGGGAAGCGTGTCCGTCAACGAGCCCAGCACTCTAAGGAGTACAACATCGACATCCCATTGGAGCAAACTCTCATCGACCCGGACTCCATCGCACCATTTGTATGA

Transcript

Chiridota_g1024

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00075	RNase_H	RNase H	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-