| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Chiridota_g10058 | RNA LARIAT DEBRANCHING ENZYME | chr_5 | 22593779 | 22635175 | + |
| CDS | |||||
| Chiridota_g10058 | |||||
| Transcript |
| Chiridota_g10058 |
| Protein |
| Chiridota_g10058 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00149 | Metallophos | Calcineurin-like phosphoesterase | Domain | Interproscan |
| PF05011 | DBR1 | Lariat debranching enzyme, C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004843 | Domain | Calcineurin-like phosphoesterase domain, ApaH type | Interproscan |
| IPR007708 | Domain | Lariat debranching enzyme, C-terminal | Interproscan |
| IPR029052 | Homologous_superfamily | Metallo-dependent phosphatase-like | Interproscan |
| IPR041816 | Domain | Lariat debranching enzyme, N-terminal metallophosphatase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12849 | RNA LARIAT DEBRANCHING ENZYME | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006397 | Biological Process | mRNA processing | Interproscan |
| GO:0008419 | Molecular Function | RNA lariat debranching enzyme activity | Interproscan |
| GO:0016787 | Molecular Function | hydrolase activity | Interproscan |
| GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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