| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8058303.1 | VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 | contig_9864_pilon | 39605 | 46448 | - |
| CDS | |||||
| CAI8058303.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8058303.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|PH|GLUE |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04157 | EAP30 | EAP30/Vps36 family | Family | Interproscan |
| PF06742 | DUF1214 | Protein of unknown function (DUF1214) | Domain | Interproscan |
| PF06863 | DUF1254 | Protein of unknown function (DUF1254) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010621 | Domain | Domain of unknown function DUF1214 | Interproscan |
| IPR010679 | Domain | Domain of unknown function DUF1254 | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR021648 | Domain | Vacuolar protein sorting protein 36, GLUE domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR037049 | Homologous_superfamily | Domain of unknown function DUF1214, C-terminal domain superfamily | Interproscan |
| IPR037050 | Homologous_superfamily | Domain of unknown function DUF1254 superfamily | Interproscan |
| IPR037855 | Family | Vacuolar protein sorting protein 36 | Interproscan |
| IPR040608 | Family | Snf8/Vps36 family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13128 | VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000814 | Cellular Component | ESCRT II complex | Interproscan |
| GO:0031902 | Cellular Component | late endosome membrane | Interproscan |
| GO:0032266 | Molecular Function | phosphatidylinositol-3-phosphate binding | Interproscan |
| GO:0032509 | Biological Process | endosome transport via multivesicular body sorting pathway | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043328 | Biological Process | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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