| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8056561.1 | TRANSLATION INITIATION FACTOR IF-3 | contig_933_pilon | 36597 | 37731 | + |
| CDS | |||||
| CAI8056561.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8056561.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00453 | Ribosomal_L20 | Ribosomal protein L20 | Family | Interproscan |
| PF00707 | IF3_C | Translation initiation factor IF-3, C-terminal domain | Domain | Interproscan |
| PF05198 | IF3_N | Translation initiation factor IF-3, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001288 | Family | Translation initiation factor 3 | Interproscan |
| IPR005813 | Family | Large ribosomal subunit protein bL20 | Interproscan |
| IPR019814 | Domain | Translation initiation factor 3, N-terminal | Interproscan |
| IPR019815 | Domain | Translation initiation factor 3, C-terminal | Interproscan |
| IPR035566 | Homologous_superfamily | Ribosomal protein bL20, C-terminal | Interproscan |
| IPR036787 | Homologous_superfamily | Translation initiation factor 3 (IF-3), N-terminal domain superfamily | Interproscan |
| IPR036788 | Homologous_superfamily | Translation initiation factor 3 (IF-3), C-terminal domain superfamily | Interproscan |
| IPR049946 | Conserved_site | Large ribosomal subunit protein bL20, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10938 | TRANSLATION INITIATION FACTOR IF-3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0003743 | Molecular Function | translation initiation factor activity | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0006413 | Biological Process | translational initiation | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| GO:0032790 | Biological Process | ribosome disassembly | Interproscan |
| GO:0043022 | Molecular Function | ribosome binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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