| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8056330.1 | ATP-DEPENDENT CLP PROTEASE | contig_9276_pilon | 5375 | 8960 | + |
| CDS | |||||
| CAI8056330.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8056330.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF02861 | Clp_N | Clp amino terminal domain, pathogenicity island component | Family | Interproscan |
| PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | Domain | Interproscan |
| PF10431 | ClpB_D2-small | C-terminal, D2-small domain, of ClpB protein | Domain | Interproscan |
| PF13481 | AAA_25 | AAA domain | Domain | Interproscan |
| PF17871 | AAA_lid_9 | AAA lid domain | Domain | Interproscan |
| PF18073 | Rubredoxin_2 | Rubredoxin metal binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001943 | Domain | UVR domain | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR003959 | Domain | ATPase, AAA-type, core | Interproscan |
| IPR004176 | Domain | Clp, repeat (R) domain | Interproscan |
| IPR019489 | Domain | Clp ATPase, C-terminal | Interproscan |
| IPR020588 | Domain | DNA recombination and repair protein RecA-like, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR028299 | Conserved_site | ClpA/B, conserved site 2 | Interproscan |
| IPR036628 | Homologous_superfamily | Clp, N-terminal domain superfamily | Interproscan |
| IPR041166 | Domain | LapB, rubredoxin metal binding domain | Interproscan |
| IPR041546 | Domain | ClpA/ClpB, AAA lid domain | Interproscan |
| IPR050130 | Family | ATP-dependent Clp protease/Chaperone ClpA/ClpB | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11638 | ATP-DEPENDENT CLP PROTEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0034605 | Biological Process | cellular response to heat | Interproscan |
| GO:0140664 | Molecular Function | ATP-dependent DNA damage sensor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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