| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8055953.1 | ATP-DEPENDENT RNA AND DNA HELICASE | contig_914_pilon | 194993 | 198334 | + |
| CDS | |||||
| CAI8055953.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8055953.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF17911 | Ski2_N | Ski2 N-terminal region | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR040801 | Domain | Ski2, N-terminal domain | Interproscan |
| IPR050699 | Family | RNA/DNA Helicase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12131 | ATP-DEPENDENT RNA AND DNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0055087 | Cellular Component | Ski complex | Interproscan |
| GO:0070478 | Biological Process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
