| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8055118.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA | contig_8881_pilon | 1954 | 3459 | + |
| CDS | |||||
| CAI8055118.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8055118.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00035 | dsrm | Double-stranded RNA binding motif | Domain | Interproscan |
| PF00448 | SRP54 | SRP54-type protein, GTPase domain | Domain | Interproscan |
| PF02881 | SRP54_N | SRP54-type protein, helical bundle domain | Domain | Interproscan |
| PF14622 | Ribonucleas_3_3 | Ribonuclease-III-like | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000897 | Domain | Signal recognition particle, SRP54 subunit, GTPase domain | Interproscan |
| IPR000999 | Domain | Ribonuclease III domain | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR004390 | Family | Signal-recognition particle receptor FtsY | Interproscan |
| IPR013822 | Domain | Signal recognition particle SRP54, helical bundle | Interproscan |
| IPR014720 | Domain | Double-stranded RNA-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036225 | Homologous_superfamily | SRP/SRP receptor, N-terminal | Interproscan |
| IPR036389 | Homologous_superfamily | Ribonuclease III, endonuclease domain superfamily | Interproscan |
| IPR042101 | Homologous_superfamily | Signal recognition particle SRP54, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43134 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0004525 | Molecular Function | ribonuclease III activity | Interproscan |
| GO:0005047 | Molecular Function | signal recognition particle binding | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0006605 | Biological Process | protein targeting | Interproscan |
| GO:0006614 | Biological Process | SRP-dependent cotranslational protein targeting to membrane | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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