| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8054691.1 | SWI/SNF COMPLEX-RELATED | contig_867_pilon | 25821 | 32893 | - |
| CDS | |||||
| CAI8054691.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8054691.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | MYB |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | Domain | Interproscan |
| PF04433 | SWIRM | SWIRM domain | Domain | Interproscan |
| PF16495 | SWIRM-assoc_1 | SWIRM-associated region 1 | Family | Interproscan |
| PF16496 | SWIRM-assoc_2 | SWIRM-associated domain at the N-terminal | Family | Interproscan |
| PF16498 | SWIRM-assoc_3 | SWIRM-associated domain at the C-terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001005 | Domain | SANT/Myb domain | Interproscan |
| IPR007526 | Domain | SWIRM domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR017884 | Domain | SANT domain | Interproscan |
| IPR032448 | Domain | SMARCC, SWIRM-associated domain | Interproscan |
| IPR032450 | Domain | SMARCC, N-terminal | Interproscan |
| IPR032451 | Domain | SMARCC, C-terminal | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR049898 | Domain | MarR-like, BRCT and chromo domains module | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12802 | SWI/SNF COMPLEX-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016514 | Cellular Component | SWI/SNF complex | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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