Detailed information of CAI8054359.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8054359.1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATEDcontig_8561_pilon5419903-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF16656Pur_ac_phosph_NPurple acid Phosphatase, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001212DomainSomatomedin B domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015914DomainPurple acid phosphatase, N-terminalInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051221FamilyLow-density lipoprotein receptor-relatedInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22722LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003993Molecular Functionacid phosphatase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0042562Molecular Functionhormone bindingInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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