| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8053238.1 | SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN | contig_8201_pilon | 76400 | 81616 | - |
| CDS | |||||
| CAI8053238.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8053238.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF16969 | SRP68 | RNA-binding signal recognition particle 68 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR026258 | Family | Signal recognition particle subunit SRP68 | Interproscan |
| IPR034652 | Domain | Signal recognition particle subunit SRP68, RNA-binding domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR038253 | Homologous_superfamily | SRP68, N-terminal domain superfamily | Interproscan |
| IPR039157 | Domain | RNA-binding protein 18, RNA recognition motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12860 | SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005047 | Molecular Function | signal recognition particle binding | Interproscan |
| GO:0005786 | Cellular Component | signal recognition particle, endoplasmic reticulum targeting | Interproscan |
| GO:0006614 | Biological Process | SRP-dependent cotranslational protein targeting to membrane | Interproscan |
| GO:0008312 | Molecular Function | 7S RNA binding | Interproscan |
| GO:0030942 | Molecular Function | endoplasmic reticulum signal peptide binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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