| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8051993.1 | 60S RIBOSOMAL PROTEIN L11-RELATED | contig_7879_pilon | 64261 | 65270 | + |
| CDS | |||||
| CAI8051993.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8051993.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00281 | Ribosomal_L5 | Ribosomal protein L5 | Domain | Interproscan |
| PF00467 | KOW | KOW motif | Family | Interproscan |
| PF00673 | Ribosomal_L5_C | ribosomal L5P family C-terminus | Domain | Interproscan |
| PF17136 | ribosomal_L24 | Ribosomal proteins 50S L24/mitochondrial 39S L24 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002132 | Family | Large ribosomal subunit protein uL5 | Interproscan |
| IPR003256 | Family | Large ribosomal subunit protein uL24 | Interproscan |
| IPR005824 | Domain | KOW | Interproscan |
| IPR005825 | Conserved_site | Large ribosomal subunit protein uL24, conserved site | Interproscan |
| IPR008991 | Homologous_superfamily | Translation protein SH3-like domain superfamily | Interproscan |
| IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
| IPR020929 | Conserved_site | Large ribosomal subunit protein uL5, conserved site | Interproscan |
| IPR020930 | Family | Large ribosomal subunit protein uL5, bacterial-type | Interproscan |
| IPR022803 | Homologous_superfamily | Large ribosomal subunit protein uL5 domain superfamily | Interproscan |
| IPR031309 | Domain | Large ribosomal subunit protein uL5, C-terminal | Interproscan |
| IPR031310 | Domain | Large ribosomal subunit protein uL5, N-terminal | Interproscan |
| IPR041988 | Domain | Large ribosomal subunit protein uL24, KOW domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11994 | 60S RIBOSOMAL PROTEIN L11-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0022625 | Cellular Component | cytosolic large ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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