Detailed information of CAI8050604.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8050604.1E3 UBIQUITIN-PROTEIN LIGASE RAD18contig_7562_pilon4442651138-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|DWNN
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04564U-boxU-box domainDomainInterproscan
PF08783DWNNDWNN domainDomainInterproscan
PF13696zf-CCHC_2Zinc knuckleDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003613DomainU-box domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR014891DomainDWNN domainInterproscan
IPR025829DomainZinc knuckle CX2CX3GHX4CInterproscan
IPR039577FamilyE3 ubiquitin-protein ligase Rad18Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR14134E3 UBIQUITIN-PROTEIN LIGASE RAD18Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006301Biological Processpostreplication repairInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097505Cellular ComponentRad6-Rad18 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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