Detailed information of CAI8049780.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8049780.1WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATEDcontig_7327_pilon2935948405-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00288GHMP_kinases_NGHMP kinases N terminal domainFamilyInterproscan
PF00483NTP_transferaseNucleotidyl transferaseFamilyInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF08544GHMP_kinases_CGHMP kinases C terminal FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR005835DomainNucleotidyl transferase domainInterproscan
IPR006204DomainGHMP kinase N-terminal domainInterproscan
IPR009145FamilyU2 auxiliary factor small subunitInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR013750DomainGHMP kinase, C-terminal domainInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036554Homologous_superfamilyGHMP kinase, C-terminal domain superfamilyInterproscan
IPR053034FamilyGlucuronokinase-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR38710WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0047940Molecular Functionglucuronokinase activityInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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