| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8049145.1 | UBIQUITINATION FACTOR E4 | contig_7189_pilon | 23475 | 29615 | - |
| CDS | |||||
| CAI8049145.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8049145.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-C2H2 |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF04564 | U-box | U-box domain | Domain | Interproscan |
| PF10408 | Ufd2P_core | Ubiquitin elongating factor core | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003613 | Domain | U-box domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR019474 | Domain | Ubiquitin conjugation factor E4, core | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR045132 | Family | Ubiquitin conjugation factor E4 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13931 | UBIQUITINATION FACTOR E4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000151 | Cellular Component | ubiquitin ligase complex | Interproscan |
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0030433 | Biological Process | obsolete ubiquitin-dependent ERAD pathway | Interproscan |
| GO:0034450 | Molecular Function | ubiquitin-ubiquitin ligase activity | Interproscan |
| GO:0036503 | Biological Process | ERAD pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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